KEGG   Vibrio spartinae: Vspart_01908
Entry
Vspart_01908      CDS       T07037                                 
Symbol
glyA2
Name
(GenBank) Serine hydroxymethyltransferase 2
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
vsr  Vibrio spartinae
Pathway
vsr00260  Glycine, serine and threonine metabolism
vsr00460  Cyanoamino acid metabolism
vsr00630  Glyoxylate and dicarboxylate metabolism
vsr00670  One carbon pool by folate
vsr00680  Methane metabolism
vsr01100  Metabolic pathways
vsr01110  Biosynthesis of secondary metabolites
vsr01120  Microbial metabolism in diverse environments
vsr01200  Carbon metabolism
vsr01230  Biosynthesis of amino acids
vsr01240  Biosynthesis of cofactors
vsr04981  Folate transport and metabolism
Module
vsr_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:vsr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    Vspart_01908 (glyA2)
  09102 Energy metabolism
   00680 Methane metabolism
    Vspart_01908 (glyA2)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Vspart_01908 (glyA2)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    Vspart_01908 (glyA2)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    Vspart_01908 (glyA2)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    Vspart_01908 (glyA2)
Enzymes [BR:vsr01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     Vspart_01908 (glyA2)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase OKR_DC_1
Other DBs
NCBI-ProteinID: QMV14647
LinkDB
Position
1:complement(2134095..2135360)
AA seq 421 aa
MFTKNDSIAGFDDAVWAAMQLEAKRQEEHIELIASENYTSPRVMEAQGSVLTNKYAEGYP
AKRYYGGCEYVDQVESLAIERACRLFCADYANVQPHSGSQANAAVYMALCNPGDTILGMS
LDHGGHLTHGAKVSFSGKLYNAVQYGLNPETGEIDYEQVERLAKEHHPKVIVAGFSAYSR
KVDWARFREIADMVDAYLFVDMAHVAGLVAAKLYPNPVPWADVVTTTTHKTLRGPRGGLI
LAQSNPELEKKLNSAVFPGGQGGPLMHVIAAKAVAFQEALQPEFQAYQQQVILNAQVMAE
VLIGRGFDIVSGGTDNHLFLLSLIKQGLTGKAADAALGRANMTVNKNAVPNDPQSPFVTS
GLRIGSPVVTTRGFKEQECTLLAGWIADILDVLDDEAKLEKTIEEVKSQVVALCAEFPVY
R
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgtttacaaagaatgattcgatagccggtttcgatgatgcggtatgggcggcaatgcag
cttgaagcaaaacgacaggaagaacacatcgagctgattgcatcagaaaactatactagt
ccgcgtgtcatggaagcgcagggttctgtactgacaaataaatatgccgaaggttatccg
gcgaaacgttattatggtggctgtgagtacgtcgatcaggtagaaagtctggctatcgag
cgtgcttgtcgtcttttttgtgccgattacgccaatgtacaacctcactcaggctctcag
gcgaatgccgcggtttacatggcattgtgtaacccgggtgatacgattctgggaatgagt
ctcgatcatggcgggcacttaacgcatggggcgaaagtcagcttttccggaaagctctac
aatgcagttcagtatggtctcaatcctgaaaccggtgaaatcgattatgaacaggtcgag
cgtctggcgaaagaacatcatccgaaggtgattgttgccggtttctctgcttattcaaga
aaagtggattgggctcgtttccgtgaaattgccgatatggttgatgcctatctgtttgtc
gatatggcgcacgtggctggtctggtcgctgccaaactctatccgaaccccgtcccatgg
gctgatgttgttaccaccacaacgcataaaacattgcgcggtccgcgtggtggcctgatc
ttggcacaaagcaatcctgaactggagaaaaaactcaactcagcggtttttcccggtggt
cagggcggcccgttgatgcatgtgattgcggcgaaagctgttgctttccaagaagcgctt
cagccggagtttcaagcctaccagcaacaagtcatcctcaatgctcaggtcatggctgaa
gtgctgatcggtcgcgggttcgacatcgtctctggcgggacggataaccatctgttcttg
ctgagcctaatcaagcagggtctcaccggaaaagccgctgatgccgcacttggcagagca
aacatgaccgtgaataagaatgcagtccccaatgaccctcagtcaccctttgtgacgtct
gggttgcggatcggctctcccgtcgtaacgactcgaggatttaaagagcaagaatgtaca
ctgctggcgggctggatcgcggacattctcgatgtccttgatgacgaagcgaagctggag
aaaacaatagaagaagtgaagtcacaggttgttgcgctttgcgctgaattccctgtgtat
cgctga

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