Vibrio spartinae: Vspart_02117
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Entry
Vspart_02117 CDS
T07037
Symbol
serS
Name
(GenBank) Serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
vsr
Vibrio spartinae
Pathway
vsr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Vspart_02117 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vsr01007
]
Vspart_02117 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsr03016
]
Vspart_02117 (serS)
Enzymes [BR:
vsr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
Vspart_02117 (serS)
Amino acid related enzymes [BR:
vsr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Vspart_02117 (serS)
Transfer RNA biogenesis [BR:
vsr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Vspart_02117 (serS)
Prokaryotic type
Vspart_02117 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF1664
FlaC_arch
ERM_helical
HIP1_clath_bdg
PspA_IM30
FapA
Exo84_C
PCRF
TACC_C
Baculo_PEP_C
Spectrin
YkyA
DUF677
Sec2p
Dynamin-like_hel_bact
TMF_TATA_bd
Motif
Other DBs
NCBI-ProteinID:
QMV14842
LinkDB
All DBs
Position
1:complement(2383025..2384332)
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AA seq
435 aa
AA seq
DB search
MLDSKLLRTELDETAIKLARRGFTLDVETIRQLEEQRKSIQVEVENLQSTRNSISKQIGQ
LMSAGDKEGAEAVKQKIGSLGNDLDARKAELEQVQKQLEDIALSVPNIPDDAAPDGLDEE
SNVEVSRWGEPKQYDFAVKDHVDLGEMGDGLDFASATKITGARFIVMKGQFARLHRAIAQ
FMLDLHSDLHGYTEMYVPYLVNADTLYGTGQLPKFGKDLFHTEPLAEKVNDEEPRRLSLI
PTAEVPLTNLVRGSILDDSELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI
TRPEDSMNALEELTGHAERVLQLLELPYRKVILCAGDMGFGARKTYDLEVWVPAQETYRE
ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQQADGRIAI
PEMLHKYMGGLTHIG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgctggattctaaattacttcgcacagagctggatgaaacagcgataaaactggcgcgt
cgcggatttaccctcgacgtagagaccattcgtcaacttgaagagcagcgtaaatcgatt
caagtcgaagttgaaaatttacaatccactcgcaactccatttcgaaacagatcggtcaa
ctgatgtcggcgggtgataaagaaggtgctgaagcagtaaaacagaaaatcggttctctg
ggcaatgatttagatgcccgtaaagcagaactggagcaggtgcagaaacagctggaagat
atcgcgttatctgtgcctaatatccctgatgatgctgcacctgatgggctggatgaagag
agtaatgtcgaagtttctcgttggggtgagccgaagcagtacgattttgccgtcaaagat
catgttgatttaggtgaaatgggtgacggactggatttcgccagcgcgacgaaaatcacc
ggtgcccggtttatcgtgatgaaaggccagtttgctcgcctgcaccgggcgattgctcag
tttatgcttgacctgcactcggatctgcatggatataccgaaatgtatgtaccatatctg
gtgaatgccgatactttgtatggtaccgggcaattgcctaagttcggtaaagacctgttt
cataccgagccgttggccgaaaaagtcaatgatgaagagcctcgtcgcttgtcactgatt
ccgactgcggaagtgcctctgacaaacttagtccggggttcaattttggatgactctgag
ttaccgctgaaaatgacggcacatacaccgtgtttccgttctgaagctggctcttatggt
cgtgatacccgggggctgatccggatgcaccagtttgataaagtcgagctggtacagatc
acgcgccctgaagattcgatgaatgcattggaagaactgacgggtcatgctgaaagagtg
ttgcagttattagagttgccttaccgtaaagtgattctgtgtgccggagatatgggtttt
ggggcacgtaagacttacgatctggaagtctgggtacctgcgcaggaaacttatcgtgag
atttcatcgtgttcaaacatgtgggattttcaggcacgtcgcatgcaagcacgtttccgc
cgcaaaggtgagaaaaaaccagagttggtccatactctgaatggttctggccttgccgtt
ggccgaaccatggttgcgattctggaaaataatcaacaagcggatggacgtattgcgatt
cctgagatgttgcacaagtatatgggtggtctgactcatatcggataa
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