Vibrio spartinae: Vspart_02186
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Entry
Vspart_02186 CDS
T07037
Symbol
ydcR_2
Name
(GenBank) putative HTH-type transcriptional regulator YdcR
Organism
vsr
Vibrio spartinae
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
Asp_aminotransf
Cys_Met_Meta_PP
HTH_36
Motif
Other DBs
NCBI-ProteinID:
QMV14910
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Position
1:complement(2459970..2461370)
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AA seq
466 aa
AA seq
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MSLYKTMASQLIREIEAGQLPEGSRLPSLRQFAKQQAVSMSTAVSCYQELESQGWIHARP
QAGYYVSPLCHQHHTPQWAQFVSRVSQVRQRYVSPAGHNGPLGISTTYLDDVALNALKQS
FRRVSKRLGQRLNQYPHPQGEPSLRHALSTHFAKLGLHLTPDELVITSGCMPAIKLAVEA
CTQVGDAIAISSPCFSGILDLLGQMGRQIVEIPSLDEGIDLDQLEQHLRQGSVKAGIFCT
SHMNPQGITMSVQQKRQLAALANHYQVPIIEDDVYLELSYAEHTPLPAKYYDQGGYILWC
GSISKSLSPSYRLGWCLPGRFTTAYVQQYTAAFFGVSLPIQLAVADFIESGHYAKQLKRR
RNRLLNLKQAYLSFLSARLPDEVKISNPQGGMVLWLQVPHLNHTRFAALIEAYQIDIRLG
ELFSTLSLYDDCFRINIGFELTQDVEEALNLLVEAIKQSSGVEDEV
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtataaaacgatggcaagtcaattgatacgcgagattgaagcggggcagttg
ccggagggaagtcgtctgccttcactacgacaattcgcgaaacaacaagccgtcagcatg
tctacagcggtgagttgttaccaagaactggaatctcaaggttggatccatgcgcgtcct
caggctgggtattatgtgtcgcccttgtgtcatcaacatcacacaccgcagtgggcgcag
tttgtgagtcgggtttctcaggtcaggcaaagatacgtttctcctgccggacacaacgga
ccactcgggatttcaacgacctatctggatgatgtggcgctgaatgcgcttaagcagagt
tttcggcgcgttagcaagcgactcgggcagcgactcaatcaatatcctcatccgcagggg
gaaccatcactacgtcatgccctcagtactcattttgccaagctcgggcttcatctcacc
ccagatgaactggtgatcacatccgggtgtatgccggcaatcaaattggcagtcgaagct
tgtacgcaagtcggggatgcgattgccatcagttcaccctgttttagcggtattttagat
ttgcttggccaaatggggcgtcagattgtcgaaatcccatcattggacgaagggatcgat
ctggaccaacttgaacagcatttacgccaaggcagtgtgaaagccggtattttctgcaca
tcgcatatgaacccgcaagggatcacgatgtctgttcagcaaaagcggcagttggcggcg
ctggcaaaccattaccaagtgccgatcatcgaagatgatgtctatcttgagctctcttat
gctgaacacacgcctttacccgccaagtattatgatcaaggtggttacatcctgtggtgt
ggttcgatatcgaaaagcttatcgcccagctatcgtttgggctggtgtttgcccggtcgg
ttcaccacagcgtatgtgcagcagtatacggctgctttctttggtgtttctctgccgatt
cagcttgctgtggctgattttattgaatctggtcactatgccaaacaattgaaacgccgg
cgcaaccggttactcaatttaaaacaagcgtatctcagttttttatcggcgcgcttgcct
gacgaagtgaagatcagcaatcctcaaggggggatggtactctggctacaagtacctcat
ctcaatcacacccggtttgctgcgctgattgaagcctatcagattgacattcggttgggg
gagctcttcagtacgctgtcactctacgatgattgtttccgaatcaatatcggttttgaa
ctcactcaggatgtggaggaggcgttaaatcttttggtcgaggcgatcaagcaatcgagt
ggcgttgaagatgaggtttga
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integrated database retrieval system
