Vibrio spartinae: Vspart_02203
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Entry
Vspart_02203 CDS
T07037
Name
(GenBank) Rhamnogalacturonase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
vsr
Vibrio spartinae
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Vspart_02203
Enzymes [BR:
vsr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
Vspart_02203
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GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
QMV14927
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Position
1:2482780..2484453
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AA seq
557 aa
AA seq
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MKKIKYLYIIMWALTSCIASFSAQAAFRLITSQNFYTVDTNAGVVFSIRRIDRGVSTQSP
GDLASLKINGVEYQNQRRGSQINSGFDWLYNNTSNVQVYAQNYQNQYIKITVQAGNLTHY
YMARNGYPYIYMATYFSSEPNIHGHVRYILRLQRNRLPYGPEPSDISQTVSTVESGDIFA
LSNGETRSKHYSNMRLKDWDAIGARGPNVGVWIVRDNQEGGSGGPFYRSLLNQATATDQE
ITYIVNYAEAQTEAFRTGVLNHYTLVVNSGQQPPADDDINLSWFSQMGLRGYVAESNRGR
VAGVGISGRNTNYEYTVGFANNRAQYWTTANPASGYFSRDNMLPGTYTMTTYKNELAVNT
QTVTVRAGQTTVLNSYQITHDPSHDRAIWRIGDWDGSPREFLNGDKLTIMHPSDVRMANW
NPSNFIVGNTPASAFPAYMWKDINNDHIIYFRLNDAQRAKAHRVRIGITVAYAGGRPKVS
VNNWTSSNPPPPSQPKTRTLTVGTYRGNNITYTFDVPASAWASGSNWNRLTVTAISGSGL
SGYLSAGYSIDSIDLLD
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatcaaatatctatatattatcatgtgggcattaacctcctgcattgcaagc
ttcagtgcacaggcagcctttcgattaatcacttctcagaatttttatactgttgatacc
aatgctggtgtggtattcagcatacgtcgcatcgatcgcggagtcagtacgcagtcaccc
ggagatcttgcttcactcaaaattaacggtgtcgaatatcagaatcagcggagaggatcc
caaattaattcgggatttgactggttatataacaatacatcaaatgtacaggtttatgct
caaaattatcagaaccaatatataaaaattacggttcaggctggtaaccttacccattat
tatatggcgagaaatggctatccatatatctacatggcaacgtatttctcatccgaaccc
aatattcatggccatgtccgatatattttaagactccaacgcaatcgtctcccttacgga
cctgaaccttctgatatttctcaaaccgtatccactgttgagtctggtgatattttcgcg
ctctccaacggagaaacccgctctaaacattactcgaatatgcgtctgaaagattgggat
gcgattggtgcaagaggacccaatgtgggtgtctggatcgtcagagacaatcaagaaggc
ggttctggtggcccattctatcgtagcctcctgaatcaggccactgccacagatcaagag
attacttatattgttaactatgctgaagcccaaacagaagcattccgtaccggcgtgctg
aatcattacacgttggtcgtgaatagcggtcaacaaccccccgcggacgatgatattaac
ctctcttggttctcacaaatgggattaagaggttatgtcgctgaatcaaaccgaggtcgg
gttgccggcgttggcatttccggacgaaataccaactatgaatacaccgttggttttgct
aacaaccgtgcacagtattggacaacggcaaatccggccagtggttacttcagccgagac
aacatgttaccgggtacttatacgatgaccacttacaaaaatgaattggccgtcaatacg
caaaccgtgaccgttcgtgccggtcagacgaccgttctaaattcctatcaaatcacccat
gatcccagccatgacagagcaatttggcgcatcggtgactgggatggcagcccacgagaa
tttctcaatggtgataaattaaccatcatgcatccttcggatgtgagaatggccaattgg
aatccatcgaactttattgtcggtaatacccctgccagtgcctttcctgcttacatgtgg
aaggatatcaacaatgaccatatcatttatttccgcctgaacgatgcacaacgtgcgaaa
gcacaccgagtccggattggaattacggtcgcctacgccgggggacgtcctaaagtttcg
gtgaataattggacatcttctaatccaccaccaccatctcaacccaagacccgaacgtta
acggtcggaacatatcggggcaacaatatcacctatacatttgatgttcccgcaagtgcc
tgggccagcgggagtaactggaatcgtctgaccgtgacagcaatcagcggctcaggtctg
agtggttacctgtctgctggttatagcatcgatagtattgacttacttgactaa
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