Vibrio spartinae: Vspart_02204
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Entry
Vspart_02204 CDS
T07037
Symbol
ompH_4
Name
(GenBank) 37 kDa outer membrane protein
KO
K10940
outer membrane protein OmpT
Organism
vsr
Vibrio spartinae
Pathway
vsr05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
Vspart_02204 (ompH_4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsr02000
]
Vspart_02204 (ompH_4)
Transporters [BR:
vsr02000
]
Other transporters
Pores ion channels [TC:
1
]
Vspart_02204 (ompH_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6588
T7-like_gp67
Motif
Other DBs
NCBI-ProteinID:
QMV14928
LinkDB
All DBs
Position
1:2485094..2486134
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AA seq
346 aa
AA seq
DB search
MKKTLIALAVLSAANVVNAAEILKTDSASVDFYGQLREELKQVDWGGKSDDTHTTLSSGS
SRAGVNSIYTINDDLDVLATVEFGIGQSNSGDSRKHYLGFASKEWGTVTVGKQSILSDDV
WGVENDWIGLGYSMLPEMTDYDMYWLQDAMIKYTLEGSAGWFKAAYSYKNGNDDPTTAEI
FAGTTFGNIELYGGVGYQEDKTTTTKNEDITITSGGVSHTVEEKTTTVKSKELKHGMLTV
NYVGDGWNLGTTYWHAEVDDNVKNTKLTSDSVAVAGSYSFTEKLSLYGGYEFIKDLQEEG
NDFNGVYSGLLYKYASWTKVYAETGFNDSDKIGNDSYWGVGVRIYW
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacgcttatagcgctggcagtgctttcagctgcaaatgtggttaatgctgct
gaaattctcaaaacagactccgcatcggtagacttttacggccaactccgcgaagaattg
aagcaagtggattggggagggaaaagtgatgatacgcacaccactctctcttcaggctca
tcccgggccggggtcaattctatctacaccatcaatgatgatcttgacgtgctggcaacc
gttgaatttggcatcggtcaaagcaacagtggcgacagccgtaaacactatctcggtttt
gcatccaaggaatggggcacagtaaccgttggtaaacagagtattctgagtgatgatgtc
tggggggttgaaaacgactggattggtttaggttatagcatgcttcctgaaatgaccgac
tatgacatgtactggcttcaggatgcgatgatcaagtatacgctcgaaggttcagcaggc
tggtttaaagcggcttattcatacaaaaacggtaatgatgatccgactacagcggaaatc
tttgccggaaccacattcggtaatatcgaactatacggtggtgtcggttatcaggaagat
aaaaccacaaccacaaaaaacgaagatattactatcacctctggtggcgtaagccacacg
gttgaagaaaaaacaaccaccgtcaaaagcaaagaactgaaacatggcatgctgaccgtc
aattatgtcggtgatggctggaatttgggaaccacttactggcatgcagaagtggatgac
aatgtgaaaaacaccaaactcacttcagattctgttgcagtggccgggtcttatagcttc
acagaaaagctatcactatacggtggttatgaattcattaaagaccttcaggaagaaggg
aatgactttaatggcgtgtattctggtttactgtataaatacgcgagttggaccaaagtc
tatgctgaaaccggatttaatgattctgataaaatcggcaatgacagctattggggcgtc
ggtgtccgcatctactggtaa
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