KEGG   Vibrio spartinae: Vspart_02529
Entry
Vspart_02529      CDS       T07037                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
vsr  Vibrio spartinae
Pathway
vsr00740  Riboflavin metabolism
vsr01100  Metabolic pathways
vsr01110  Biosynthesis of secondary metabolites
vsr01240  Biosynthesis of cofactors
vsr02024  Quorum sensing
Module
vsr_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:vsr00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    Vspart_02529 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Vspart_02529 (ribD)
Enzymes [BR:vsr01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     Vspart_02529 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     Vspart_02529 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: QMV15235
LinkDB
Position
1:complement(2812542..2813663)
AA seq 373 aa
MSVFSAFDYQMMSKAITLAKRGVYTTTPNPNVGCVLVKAGQVVGEGYHVQAGGPHAEVHA
LRQAGAQAKGATAYVTLEPCSHYGRTPPCAEGLIQAGVVKVICAMQDPNPQVAGRGIAML
QAAGIEVLTGLLEADANALNPTFLKRMKTGMPWVQLKMAASLDGQTALANGVSQWITSSE
ARADVQKFRAKASAILSTSQTVIADDAALTVRHHALPESVGQRYPLAEMRQPVRIILDQH
HRLHAGLKLYDGDGAVLTVGQDDADICVAVDSTGKLDLRALLCQLADKHQINHLWVEAGA
TLSQALLSQQLVDEIILYLAPKLMGSDGRGLFGRFGFESMQDVFQLDIADVVRVGPDIRM
TVIPQYHSPKVQI
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgagtgtttttagcgcgtttgactatcaaatgatgtcaaaagcgatcacattagcaaag
cgaggtgtttacaccacaacgcccaaccctaatgtaggctgtgtgctggtgaaagccggt
caggtcgtcggggaaggttatcatgtgcaggctggtggccctcatgcggaagttcacgcg
ttgcggcaggctggcgcgcaagcgaaaggcgcaaccgcttacgtgacactggaaccttgt
tctcattatggtcgaacgcccccttgtgctgaaggtttgattcaggctggcgtagtcaaa
gttatttgtgcgatgcaagatccaaatccgcaagtggccggccgaggaattgcgatgctg
caagccgcaggcattgaagtcctgactggattactggaagcagatgcaaacgcactcaat
cctactttcctcaaacgaatgaaaaccgggatgccatgggttcagctgaaaatggcagcg
agccttgacgggcagactgctttagcaaacggtgtcagtcaatggatcacttcttcggaa
gcccgggctgatgtgcaaaaatttcgggccaaagccagtgcaattttgtcaaccagccaa
acggtgattgcagatgatgcggccctgacagttcggcatcacgcgctccctgaatcggtt
ggtcagcggtatccattggctgagatgcgtcaaccggtacgaatcattttagatcagcac
caccgcttacatgccggactgaaactgtatgatggcgacggggctgtattgactgtcggg
caggacgacgcggatatttgtgttgctgttgactcaacaggaaaactcgacctccgtgct
ctgctatgccaattagctgacaagcatcaaatcaatcatctttgggttgaagcgggggcg
acactctcgcaggcattgctgtcacagcagttagtcgatgaaattattctctatctggct
cccaaattaatgggcagtgacggaagaggattgtttggtcggtttggttttgaatcgatg
caagatgtatttcagctcgatatcgctgatgtggttcgggttggccccgacattcgtatg
actgtgataccgcagtatcattcccccaaagtacaaatataa

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