Vibrio spartinae: Vspart_02682
Help
Entry
Vspart_02682 CDS
T07037
Symbol
gcdB
Name
(GenBank) Glutaconyl-CoA decarboxylase subunit beta
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
vsr
Vibrio spartinae
Pathway
vsr00362
Benzoate degradation
vsr00620
Pyruvate metabolism
vsr00650
Butanoate metabolism
vsr01100
Metabolic pathways
vsr01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
Vspart_02682 (gcdB)
00650 Butanoate metabolism
Vspart_02682 (gcdB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Vspart_02682 (gcdB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsr02000
]
Vspart_02682 (gcdB)
Enzymes [BR:
vsr01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
Vspart_02682 (gcdB)
Transporters [BR:
vsr02000
]
Other transporters
Primary active transporters [TC:
3
]
Vspart_02682 (gcdB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OAD_beta
Borrelia_P13
ThiG
Motif
Other DBs
NCBI-ProteinID:
QMV15386
LinkDB
All DBs
Position
1:complement(2995608..2996738)
Genome browser
AA seq
376 aa
AA seq
DB search
MDGLLTLWTETGIANFEFGQICMILVGCLLLFLAVAKGFEPLLLLPIGFGAILANIPNAG
FTEPGGLLYYIYHVGIESGVFPLLIFMGVGAMTDFGALIANPKTLWLGAAAQLGIFATLI
GAILLNLVPGMEFSMADASSIAIIGGADGPTAIFLASRLSPDLLGAIAVAAYSYMALVPI
IQPPIMKALTTPAERQIQMAQLRYVGRLEKIFFPMLVLLMTILLLPSATPLVGMFCLGNL
MREVGVVERLSKTAQNELINIVTIFLGLGVGSKLQSDKFLNLETLGILALGAVAFSIGTA
GGVLMAKLLNKLSKESINPLIGAAGVSAVPMAARVVNKVGLQANPQNFLLMHAMGPNVAG
VLGSAVAAGILLALVG
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggacggattactaaccttatggacggagactggtattgcaaattttgaatttggtcag
atttgcatgattcttgtcggatgtctgttgctatttttagcggttgccaaagggtttgaa
cccttactgctattaccgattggctttggcgccattttagccaatattcccaacgctggt
tttaccgagccgggcggattactttattatatctatcatgtcggtattgagtctggtgta
tttccgctgttgatctttatgggggtcggcgctatgactgattttggggcgttgattgcg
aacccgaagacgttatggctgggggccgcagcccaattggggatttttgccactttgatt
ggggcgattttgctcaatttggttccggggatggaattctccatggcggatgcttcgtca
atcgcaattattggtggggctgatgggccgacagcgatatttctggcgagtcgtttatcg
cctgatttattaggggcgattgccgttgcagcatatagctatatggcgttagtaccaatt
attcagccaccaatcatgaaagcgctgacaacaccggcagagcggcaaatacaaatggca
caattgcgctatgttggcaggctagagaaaattttcttcccgatgctggtgttattgatg
acgatcctcttgttgccatcagccacgcctttagttggcatgttttgtctcggcaatctt
atgcgggaagttggggttgtcgagcgtttatcgaaaaccgctcagaatgagctgattaat
attgtgaccatattccttggattaggggtcggctctaaattacagtccgataaattctta
aatcttgaaacattaggtattctggcattgggtgcggtggcatttagtatcgggactgcc
ggtggcgtattgatggctaagttattgaataagctgtctaaagaaagtattaatccgctg
attggtgcggcgggtgtctccgctgtaccgatggccgctcgggtggtgaataaggtcgga
ttgcaggcaaacccgcagaattttctactgatgcacgcaatgggccccaatgtggctggc
gttttaggatctgcggttgctgcggggattcttttagcgctagtcggttaa
DBGET
integrated database retrieval system
