Vibrio spartinae: Vspart_03087
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Entry
Vspart_03087 CDS
T07037
Symbol
orn
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
vsr
Vibrio spartinae
Pathway
vsr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Vspart_03087 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vsr03019
]
Vspart_03087 (orn)
03009 Ribosome biogenesis [BR:
vsr03009
]
Vspart_03087 (orn)
Messenger RNA biogenesis [BR:
vsr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Vspart_03087 (orn)
Ribosome biogenesis [BR:
vsr03009
]
Eukaryotic type
Pre-60S particles
RNases
Vspart_03087 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QMV15736
UniProt:
A0A1N6M4M2
LinkDB
All DBs
Position
1:complement(3423122..3423667)
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AA seq
181 aa
AA seq
DB search
MALNDQNLIWIDLEMTGLDPEVHKIIEIATIVTDSELNILAEGPVLAIHQSEQELAKMDE
WCVTTHTQSGLVERVQQSAVTEAEAVRLTIKFLEQWVPKGNSPICGNSIGQDRRFLVKYM
PELEAYFHYRYLDVSTLKELTKRWQPDILDGFQKKGSHLALDDIRESIAELQYYRKTILT
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggctttaaatgatcaaaatctgatttggattgatttagaaatgacaggtctcgatccg
gaagtacacaagattattgaaattgccacgattgtgacagatagcgaattaaatattctg
gctgaaggcccggtgctcgctattcatcagtcagagcaagagttggctaagatggatgaa
tggtgtgtaacgacgcatacccaaagtggtttggttgaacgggtccagcaaagtgcagtg
accgaagcagaagcggtccgattgacgataaaatttttagaacagtgggtcccaaaagga
aattcaccaatctgtggcaatagtattggtcaggaccgtcgttttctggtgaagtatatg
ccggaattggaagcttattttcattatcgttatctggatgtgagtacgctgaaagagctg
acaaaacgttggcagccagacattttggatggattccagaaaaagggaagccatttagca
ctggatgacattcgggaatcaattgctgagctgcaatattatcgaaaaacaatattgacg
atttga
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