Vibrio spartinae: Vspart_03270
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Entry
Vspart_03270 CDS
T07037
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vsr
Vibrio spartinae
Pathway
vsr00300
Lysine biosynthesis
vsr00470
D-Amino acid metabolism
vsr01100
Metabolic pathways
vsr01110
Biosynthesis of secondary metabolites
vsr01120
Microbial metabolism in diverse environments
vsr01230
Biosynthesis of amino acids
Module
vsr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Vspart_03270 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Vspart_03270 (lysA)
Enzymes [BR:
vsr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Vspart_03270 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QMV15899
UniProt:
A0A1N6MA12
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All DBs
Position
1:complement(3619306..3620559)
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AA seq
417 aa
AA seq
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MDYFNYQNDGQLCAEGVRLAELAKDYGTPLYVYSKATLERHWNAFDQAVGAHPHLVCYAV
KANSNLGVLSVLARLGSGFDIVSQGELERVLAAGGNPEKIVFSGVGKTEAEMKRALELKI
KCFNVESESELHRLNRVAQSLGVKAPVSLRINPDVDAKTHPYISTGLRDNKFGIAFDRAR
EVYRLAHQLEHLDVHGIDCHIGSQLTQIDPFIDATDRLLALIDALKAEGIHIRHLDVGGG
LGVVYDAETPPQPAEYAKALLSRLGSYQDLELVFEPGRAIAANAGILLTKVEFLKHTEYK
NFAIIDAAMNDLMRPALYQAWQKIVPVTPREGTALVYDLVGPVCETGDFIGKERELVLEE
GDLLAVRSAGAYGFAMSSNYNSRSRAAEVMVDGEQVHLVRQREPLSSLWALESVLPE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggattattttaattaccagaacgatggacagctatgtgctgaaggggttcgtctcgca
gagctggcaaaggactatggcacaccactttatgtttattcaaaagcaacgctagaacgc
cactggaatgcgtttgatcaggctgttggcgcacatccacatctggtttgttatgccgtg
aaagcaaactccaatttaggggtgttgagtgtcttggcgcggcttggctctggatttgat
attgtatcccaaggggagctggagcgggttttagcggctggcggaaatcccgagaaaatc
gtgttttccggtgtgggtaaaaccgaagcggaaatgaaacgtgcactcgaattgaagatt
aagtgcttcaatgttgaatccgaatccgagttacaccgtttgaaccgtgtggctcagtct
cttggtgtgaaggccccggtatctctacggattaacccggatgttgatgccaaaacacat
ccatatatctcgacaggactacgtgacaataaattcgggattgcttttgaccgcgcgcgc
gaagtctatcgcttagcgcatcaattggagcatctggacgttcatgggattgattgtcat
atcggttcacagttgactcaaatcgatccctttattgatgcaacggaccgtcttctggcg
cttatcgatgcgcttaaagcggaaggcatccatattcgccatctggatgtcggtggtggt
ttgggtgtggtctatgatgcagaaacgccaccacagccggcagaatatgccaaagcatta
ctctcgcgtctgggaagttatcaagatttggagctggtgtttgaaccggggcgggcgatt
gccgcaaatgccggaattctactgaccaaagtcgaattcttgaagcataccgagtataag
aattttgcgattattgatgcagcgatgaatgatctcatgcgtccggctttgtatcaggca
tggcagaaaattgtaccggttactccccgggaaggaacggcgctggtttatgatttagtg
gggcctgtttgcgagaccggtgattttatcggtaaagagcgcgagctggtgcttgaggaa
ggtgatctcctggcggttcgttcggcaggtgcttatggatttgccatgtcatcaaactat
aattcgcgttcacgcgccgctgaggtcatggttgatggagaacaggttcatctggtacgc
cagcgcgagcctctcagtagtttgtgggctttggaaagtgttttaccggagtaa
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