Vibrio spartinae: Vspart_03284
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Entry
Vspart_03284 CDS
T07037
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vsr
Vibrio spartinae
Pathway
vsr03030
DNA replication
vsr03410
Base excision repair
vsr03420
Nucleotide excision repair
vsr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Vspart_03284 (polA)
03410 Base excision repair
Vspart_03284 (polA)
03420 Nucleotide excision repair
Vspart_03284 (polA)
03440 Homologous recombination
Vspart_03284 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsr03032
]
Vspart_03284 (polA)
03400 DNA repair and recombination proteins [BR:
vsr03400
]
Vspart_03284 (polA)
Enzymes [BR:
vsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Vspart_03284 (polA)
DNA replication proteins [BR:
vsr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Vspart_03284 (polA)
DNA repair and recombination proteins [BR:
vsr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Vspart_03284 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Vspart_03284 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QMV15912
LinkDB
All DBs
Position
1:complement(3633788..3636559)
Genome browser
AA seq
923 aa
AA seq
DB search
MAHIPDNPLILIDGSSYLYRAFHAYPSTMSNGEIPTNAVYGVINMIRSMMRQYPSERIAV
VFDAKGKTFRDEMYAEYKANRPPMPDELRCQIEPLHKIIRSMGLPLLAIEGVEADDVIGT
IAMQATNADMPVLISTGDKDMAQLVNDKVTLINTMTNLVMDREGVVEKFGIPPELIIDYL
ALMGDKVDNIPGVPGVGEKTATALLQGIGGLEAIYQNLDKIADLGFRGSKTMAKKLAENK
DNAWLSYQLATIKLDVALEDTLDTLVKRPADREELIQQYGQLTFKSWLNELLESPEGSPE
MNQASDAASATMDTSAVNIDRSQYQTVLNESDFMAWLDKLKNASLFAFDTETDGLDYMTA
NLVGVSFAINEGEAAYVPVAHDYMDAPEQLDRDWVLAQLKPVLEDEHCHKVGQNLKFDMS
ILARYDIELRGIAHDTMLASYVYDSVGGRHDMDSLALRFLQHSCISFEQIAGKGKNQLTF
NQIDLEQAGVYAAEDADVTLRLHHRLIDHLAQNEALLRVYQDIEVPLVPVLSRMERTGVH
IDDMRLNVQSQEIAQRLEELESKAFEIAGESFNLSSPKQLQHIFFEKMGLPVVKKTPSGT
PSTNEEVLQELALDYPLPKVILEHRGLAKLKSTYTDKLPKMINPVTGRVHTSYHQAVTAT
GRLSSTDPNLQNIPVRNEEGRRIRQAFITEPGWKIVAIDYSQIELRIMAHLSGDQSLLDA
FQQGKDIHAATAAEILGVSLEQVSSEQRRRAKAVNFGLIYGMSAFGLAKQLGIPRTEAQS
YMERYFERYPGVMQYMEDTRAQASEQGYVETLFGRRLHLPEIRSGNGMRRKAAERAAINA
PMQGTAADIIKKAMLFVDAWIEQEGHGRVRLLMQVHDELVFEVQESSLTEIESKIQKLME
SAATLRVPLVAEVGRGESWEKAH
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggcccatattcctgataacccactcattttgattgacggttcttcttatctttatcgt
gcattccatgcctatccaagcaccatgagcaatggtgaaattcccactaatgccgtttat
ggtgtcattaatatgatccgtagcatgatgcgtcagtatccttcggagcggattgcagtc
gtgtttgatgccaaaggcaaaacgttccgcgatgaaatgtacgccgaatataaagccaat
cgcccaccgatgccggatgaattacgttgccagattgagccgctgcataagattatccgt
tctatgggattaccgttgctcgccatcgaaggtgtggaagccgacgatgtgatcgggacg
attgcaatgcaagcgaccaatgccgacatgccagtgctgattagcacgggtgataaagat
atggcgcaattggtgaacgataaggtgaccttgattaacaccatgacgaatctcgtgatg
gatcgcgaaggcgtggtagagaagttcgggatacctccggaactgatcatcgattatctg
gcattgatgggtgataaagttgataacattccgggcgtgccgggtgtcggtgaaaagacg
gcgactgcattgcttcagggaatcggtggtttggaagcgatctatcagaatctcgataaa
attgctgacttgggattccgcggctccaagacgatggcgaagaagctggcagagaataaa
gacaatgcgtggctttcttaccaactcgcgacgattaaactggatgtcgcgctggaagac
acactagatacgctggtcaaacgccctgcggatcgagaagaactgattcagcagtatggg
caactgacatttaaatcctggctgaatgaattgcttgaaagtccggagggaagccctgaa
atgaatcaggcatctgatgcggcttcggcaacgatggatacatcggcggtcaatattgat
cgcagccagtaccagactgtcttaaatgaatctgattttatggcttggctagacaagcta
aaaaatgcatctctgtttgcttttgataccgaaaccgatggattggattatatgacagcc
aatctcgtcggggtgtcatttgcaatcaacgagggtgaagcggcctatgtgccggttgcg
catgactacatggatgcaccggaacagttggatcgcgattgggtattagctcagcttaag
ccggttctggaagatgaacactgccataaagtcggacagaacctgaaatttgatatgagt
attctggctcgttatgacattgagttacgcgggattgcgcatgataccatgctggcttct
tacgtatatgacagtgtgggcggtcggcatgatatggatagtctggcgctccgttttctg
caacatagttgtatttcattcgaacaaattgccggcaaaggtaaaaatcagctgacattt
aaccagatcgatctggaacaagcgggtgtttacgcggcagaagatgcggatgtcacactc
cggttacaccatcgcttgattgatcatctggcgcagaatgaagcactattgcgcgtctac
caagacattgaagtgccactggtgcccgtgttgtcaaggatggagagaaccggtgtccat
atcgacgacatgcgtttgaatgttcagtctcaggaaattgctcagcgtttagaggaattg
gagagcaaggcatttgagattgccggagagtcatttaacttgagttctccgaagcagcta
caacatatcttctttgaaaaaatggggctgccggtggtgaaaaaaacaccgtcggggacg
ccatccactaatgaagaagttttacaggagctggcactggattatccgttaccgaaagtg
attctggagcatcgtggtttggcgaaactgaaatcgacttacaccgataagttgcccaaa
atgattaatccggtcacagggcgcgtgcatacctcttatcatcaagcggtgaccgcaacc
ggacggctttcatctacggatccgaatctacagaatattccggtgcggaatgaagaaggc
cggcggattcgtcaggcatttatcactgaacccggttggaagattgtcgcgatcgactat
tctcagattgagttgagaattatggcacatttgtctggtgatcagtcgctattggatgct
ttccagcaagggaaagatattcatgccgccacggccgctgaaattttaggggtttcactc
gagcaggtctccagcgaacagcgtcgccgcgccaaagccgttaacttcggtttgatctat
ggcatgagtgcgtttggtctggctaaacagcttggtattcctcggacagaagcgcaatct
tatatggagagatacttcgaacgttatcccggtgtgatgcagtacatggaagatacccgt
gcgcaagcaagcgagcagggctatgtcgaaacactctttggtcgtcgtttgcatctgccg
gaaattcgctctggtaatgggatgcggagaaaagccgcagaacgcgctgcgatcaatgca
ccgatgcagggaactgccgctgatatcatcaaaaaagcaatgctatttgttgatgcgtgg
atcgagcaagaaggtcatgggagagtccggttattgatgcaggtacacgatgagctagtt
tttgaagtccaagagtcatctctgaccgaaattgaaagtaaaatacaaaaactcatggaa
tccgcagcaaccctgcgtgtgcctttagttgcagaggtaggacggggtgaaagctgggaa
aaagcccattaa
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