Vibrio spartinae: Vspart_03305
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Entry
Vspart_03305 CDS
T07037
Symbol
araF
Name
(GenBank) L-arabinose-binding periplasmic protein precursor
KO
K10537
L-arabinose transport system substrate-binding protein
Organism
vsr
Vibrio spartinae
Pathway
vsr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vspart_03305 (araF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsr02000
]
Vspart_03305 (araF)
Transporters [BR:
vsr02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
L-Arabinose transporter
Vspart_03305 (araF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_4
DUF1651
Motif
Other DBs
NCBI-ProteinID:
QMV15931
UniProt:
A0A1N6M9Z9
LinkDB
All DBs
Position
1:3655562..3656566
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AA seq
334 aa
AA seq
DB search
MKTIRKKLAVAALAGTALLSASAHAFFGNDDDTLKLGYLVKQPEEPWFQTEWNFAEKAGK
EYGFDVIKMAVPDGEKTLNAIDTLAASGAKGFVICTPDPKLGPAIMAKAKSYDLKVITVD
DQFLNAKGKPMTDVPLVMMAASQIGQRQGKELYKEMTKRGWNPANSAVMAITADELDTAR
RRVDGSILALKEAGFPADQIYRVPTKTNDIPGALDAANSLLVQYPNVKHWLVVGMNDNTV
LGGVRATEGQGFDAKNVIGIGINGVDAVNELAKSKPTGFYGSLLPSPDVHGFKSIESLYK
WVEDGVEPKKFVEVTDVVLITRENYKAELKKKGL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgataagaaaaaaactcgctgtcgccgctttagcagggactgcactactcagt
gcctctgctcatgctttctttggtaacgatgatgacacgctcaaactcggttatctggta
aaacaaccagaagaaccttggttccagactgaatggaattttgcggaaaaagccggcaaa
gagtatggcttcgacgtgattaagatggccgtccccgatggagagaaaaccctcaatgcg
atcgatacccttgcggcgagcggtgccaaaggttttgtcatttgtacccctgaccctaaa
ctcgggccagccattatggcaaaagccaagagttatgatctcaaagtcatcacggttgac
gatcagttcctcaatgccaaaggcaaaccgatgaccgatgtcccattggtgatgatggcc
gccagtcaaatcggtcaacgtcagggaaaagagctgtataaagaaatgaccaaacgcgga
tggaacccggctaacagtgccgttatggcaattaccgcagatgaactcgataccgctcgt
cgtcgggtcgatggttccatcttggcactgaaagaagcaggcttcccagcagatcaaatc
tatcgcgtaccaaccaaaaccaacgacattcccggtgcactggatgccgccaactcgctg
ttggtgcaatatccgaatgtcaaacactggctggtggtcggcatgaatgacaacaccgtg
ttgggtggcgttcgggcaactgaaggtcagggttttgatgcgaaaaacgtgattggtatt
ggtatcaatggtgtggatgccgtcaacgagctggcgaaatccaaaccaaccgggttctac
ggatcgttacttccgagtccggacgtgcacggctttaagagtatcgaatcgctatataaa
tgggttgaagatggtgtcgaaccgaagaaattcgttgaagtcactgatgttgttctgatt
acccgcgagaactacaaagcagaactgaagaaaaaaggactgtaa
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integrated database retrieval system
