KEGG   Vibrio spartinae: Vspart_03881
Entry
Vspart_03881      CDS       T07037                                 
Symbol
helD
Name
(GenBank) Helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
vsr  Vibrio spartinae
Brite
KEGG Orthology (KO) [BR:vsr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vsr03400]
    Vspart_03881 (helD)
Enzymes [BR:vsr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Vspart_03881 (helD)
DNA repair and recombination proteins [BR:vsr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Vspart_03881 (helD)
SSDB
Motif
Pfam: UvrD-helicase Helicase_IV_N AAA_19 UvrD_C UvrD_C_2 Viral_helicase1 AAA_12 AAA_30 Dna2
Other DBs
NCBI-ProteinID: QMV16487
LinkDB
Position
2:485584..487653
AA seq 689 aa
MQLKASNTAKYFMNDEFYQVAIDSEKLIVRSRVAEERIPFAVWDGSVRVRRGIVWGELEF
FAHVHDGQRYSWLIRGLPWPQCRKFADQAVAAYRQWHQSQCAQLATYLPAWQQALSQRQN
EPAFLAHSKIREWHRQVSQDLTALGMSLDEIEQRVPGLIAEIVAWYHQPSVMLSQRNETW
IEAQRERWETLFHSLESSPLNPSQQSAVLLNDDYNLVLAGAGSGKTSVLSARVAYLIESG
LAKADQILLLSFGKDAALEMEQRLKDRVGPAAQHVTVNTFHQLGLRIIHEVEGQGVQLSP
IVGETKLKEAWMTDWLKKHWMTPTNFKRWQKHLNQWPIAYIKGDEELGSHVENPKLISWL
AQQVEQLSLLGASKKEIQQKIVERADYPRLNSELALCWPCYQAWNEMLKTQGQLDFNLMI
SQATAYVRKKKYQFRWSFIMVDEYQDISPPRLALLEALCKQYQSNGNLFAVGDDWQSIYQ
FAGSNVDLTTGFKQRFPASTVTHLDTTYRFNNRLAEVANTFVQSNPQQIPKSLNSLKIQK
SNAVALLPQARIEKVIEQLNRKRSAKNEVKSLLILGRNHYHKPELLTAWQKQYQQLDIQF
MTCHASKGKEADFVIIVNVDEGQFPTKTKTLHLDDVLTLSNETFPNAEERRLFYVAMTRA
REKVWVAYNAGGSTFVKELLEGPYAVSKL
NT seq 2070 nt   +upstreamnt  +downstreamnt
atgcagctgaaagccagtaatactgcgaaatattttatgaatgatgagttttaccaagtc
gcgattgatagcgaaaaactcatcgtccgttctcgtgttgcagaagaaagaattccattt
gcagtctgggatggttcggtccgtgtccgacgcgggattgtgtggggcgaacttgagttt
tttgcccatgtgcatgatggccagcgttatagttggttaattcgcggattaccttggcct
cagtgccgaaagtttgctgaccaagcggttgctgcctatcgtcaatggcaccaatcgcag
tgtgctcagcttgcaacttacttaccggcttggcagcaagcgttgagtcaacgtcagaat
gaacccgcttttctcgcgcattccaagatcagagaatggcaccggcaggtgagccaagat
ttgacagcattggggatgtctctcgatgagattgagcaacgggttcccgggctgattgca
gagattgttgcatggtatcatcaaccttccgtaatgttgtcacagcgtaacgaaacatgg
attgaggcacagcgtgagcgctgggagacgttatttcactcactggaatcctcgccttta
aatccatcgcagcagtccgccgttcttttgaatgatgattacaatttggtgctcgctggt
gccggctcgggaaaaaccagcgtgctttctgcccgggttgcctatttgattgaaagtggg
ttggcaaaggccgatcaaatcctattgctttcattcggtaaagatgcggcattagagatg
gaacaacgattgaaagaccgggtggggccggcagcgcaacatgtcacagtgaatacattt
catcagcttggattgcggattattcatgaggtggaagggcaaggcgtgcaactatccccg
atcgttggcgaaaccaagctcaaagaagcctggatgaccgattggctcaaaaaacactgg
atgacaccgacaaactttaaacggtggcaaaaacacctaaatcaatggccgattgcttat
atcaaaggggatgaagagctggggagtcatgtcgaaaaccctaaattgatttcttggttg
gctcagcaagtcgagcagttgtcgctgttgggagcgagtaaaaaagagattcagcaaaaa
atcgtcgagcgagcagattatccgcgtctgaacagtgagcttgcattatgctggccatgt
tatcaggcatggaatgagatgcttaagactcagggacaactggattttaatctgatgatc
agccaggcgacagcttatgtcaggaagaaaaagtatcaattccgttggtcgttcatcatg
gttgatgaataccaggatatttcgccgccgcgtcttgcgttattagaggcgctttgcaaa
cagtatcaatcaaacgggaatctctttgccgtcggtgatgactggcaatcaatttatcag
tttgccggttccaatgttgatttaaccacgggcttcaagcagcgttttcctgcatcgaca
gtgacgcatcttgacaccacttatcggtttaataaccgattggctgaggtagcaaatacc
tttgtgcagtctaatccgcagcagataccgaagtcgctcaatagtctgaaaatacagaaa
agcaatgcggtggcattgttgccccaagcacggattgaaaaggtcatcgagcaactaaat
cgcaagcgttcagccaaaaatgaagtcaaatcactattaattcttggccgaaatcactat
cacaaaccggaattactgacagcatggcaaaagcaataccaacagcttgatattcagttc
atgacctgtcatgccagtaagggcaaagaagccgattttgtgatcattgtgaatgtggat
gaagggcagtttccgaccaaaacgaaaaccttgcatttagatgatgtattaacattatca
aatgagactttcccgaatgcagaagaacggcggttattttatgttgcaatgacccgagca
agagaaaaagtttgggttgcctacaatgcaggcggttccacctttgtcaaagagcttctt
gaggggccatacgcggtgtctaaattataa

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