KEGG   Vibrio spartinae: Vspart_03910
Entry
Vspart_03910      CDS       T07037                                 
Symbol
ygcB
Name
(GenBank) CRISPR-associated endonuclease/helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
vsr  Vibrio spartinae
Brite
KEGG Orthology (KO) [BR:vsr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vsr02048]
    Vspart_03910 (ygcB)
Enzymes [BR:vsr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Vspart_03910 (ygcB)
Prokaryotic defense system [BR:vsr02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    Vspart_03910 (ygcB)
SSDB
Motif
Pfam: Cas3_HD Cas3-like_C_2 DEAD ResIII Helicase_C AAA_16 AAA_22
Other DBs
NCBI-ProteinID: QMV16516
LinkDB
Position
2:525523..528246
AA seq 907 aa
MEEPAYFLYWGKAHQAPQHGGDDYHLLPYHSLDVAAVGQQFLHPEKPLTCELAAFLNITP
SQLNRLFTFALALHDLGKFSSAFQALYQPPGAFWLPNCRRTYDGSMYRHDRLGLFFWEVL
KDSFYSELSDLTQYCENEQDQLDQTLLMMLHCVFGHHGQPVENAAMVTMKKFTEPHNLDA
AGHFVHDAYHLIQPDIPLERLIDQVWGSRLAQVSWQLAGIAVLADWIGSNQVYFQYQCQP
KPLCDYWHEAQAAATEALKMFGLSQNSRPAPFQSVEAHFHFQPTPLQQWAEEVPLDDAPQ
LFVLEDVTGSGKTEAALVLTHRLMSANAADGFYFGLPTMATSNAMFDRIVDYYQQMFVAD
QDNIPSIVLAHAAREMNERFQQATLESGPRDTNYAEMDRSATAQCSQWLADSRKKALLAP
VGVGTIDQALLAVLPRRHQSLRLLGLHRKVLIFDEIHTADDYMFELLEALLRLHLHQGGS
AILLTATLSLKQRQRLADIWLNTESGPHLLLKQTHFPLATQLIYGNPTPVREQPLASRAD
VSRAVQVDFVHHEQVCIERIVSAVEQGQCVVWVRNSVDDALAGYRLLNTILARPDDCLLF
HSRFILNDRRRIETQVLQWFGKKSTGLHRQGKVLIATQVFQESLDADADVMISDLCPIDD
LIQRAGRLHRHTRNESGCYMAQGRDQRSAPILYVHAPEWEDEPAKDWLSRNFRNTEFVYR
SPGRLWLGQRILRQLEAIRMPEQARQLIEAVYGDTATESIPTSLQSQEEALMGDECAKAN
RAWSQLIDFRYGYHTNSSQYWTEDHQEIGTRYSDVEMVSVLLLKQTENGQFGPWVDDAQF
AIALSTVKVGKKKFADHLVMLSEVQTDAVHRAYPTTKYLQLWMPETDPLFTYDETAGFCA
QQKQEVR
NT seq 2724 nt   +upstreamnt  +downstreamnt
gtggaagaaccagcctacttcttatactggggcaaggcacatcaagcaccacagcatggt
ggtgatgactatcatcttctaccctatcacagccttgatgttgcagcggtcgggcagcaa
ttcttacatcctgaaaaaccattaacctgcgagctggctgcttttctaaatatcactcct
agtcagcttaatcgtctgtttacttttgcgcttgctctgcatgatctaggcaaattttcc
tcagcttttcaggcgttatatcagcctccgggggctttttggttaccaaattgccgccgg
acatatgatggcagcatgtatcgacatgatcgattagggctatttttttgggaagtattg
aaagattcgttctattcagagctttccgatttgacccaatattgtgaaaacgaacaagac
cagctcgatcaaactctgttgatgatgcttcattgtgtcttcggtcatcacggtcaaccc
gttgaaaatgcagcaatggtgacaatgaaaaagtttactgaaccgcataaccttgatgct
gctggccattttgttcatgacgcttatcatctgatacagccggatataccgttggaaagg
ttgatcgatcaagtatggggcagtcgtctggcacaggtgagttggcagcttgctggcatc
gctgtgttggcggattggattggctcgaatcaagtgtactttcagtatcagtgtcagccg
aaacctctttgtgactattggcatgaggcacaagcggctgcaactgaggctctcaagatg
tttggtttatcgcagaatagtcggcctgcaccgtttcagtctgtagaggctcattttcat
tttcagccgacaccattacaacaatgggctgaagaggttcctctcgatgatgccccgcag
ttatttgtgttggaagatgtgaccggatccggtaaaacagaagccgctttagtgctgaca
catcgcttaatgtctgcgaatgcggctgatggcttttattttggtctgccgactatggca
acttcaaatgcgatgttcgacagaatcgtagattactaccaacagatgttcgttgcggat
caggacaatattcccagtattgttttggcacatgccgcccgggagatgaatgaacggttc
caacaagcaacactggaatcaggcccgagagatacgaattatgcggagatggaccgaagt
gcaacggctcagtgtagtcaatggttggcggattcacgtaaaaaagcattactggccccc
gttggtgtaggaaccatcgatcaggcactattggcagtgttaccgcgtcgtcaccagtca
ctccgtttattgggtttgcatcgaaaagtactgatttttgatgaaatacatacagcagat
gactatatgtttgagttacttgaggctctgcttcggttgcatttacatcaaggcggatca
gcgattttactgacggcaacactctccctgaaacagcgtcagcgtttggctgatatctgg
ctgaataccgaatccggcccacatttacttctgaaacaaacacactttcctttagcaacc
cagcttatctatggcaatccgacaccagtcagagagcaacctttagccagtcgtgcagat
gtcagtcgagcggttcaggttgattttgttcatcatgagcaagtgtgtattgagcggatc
gtgtctgctgtggagcagggacaatgtgtggtatgggtgagaaactcggttgatgatgca
ttggctggttatcggttgctcaatacgatactggcgaggccggatgactgtttgttgttc
catagccgtttcattctcaatgatcgtcgtcggatagaaacacaagtattgcaatggttc
ggtaagaaaagtacagggttacatcgacagggtaaagtcttgattgcgactcaggtcttt
caggaaagtttagatgctgatgccgatgtgatgatttctgatttatgtccgattgatgat
ctgattcagcgtgctggtcggttacaccgtcacactcggaatgagagtggctgttatatg
gctcaggggcgcgatcaacgttcggccccgattttatatgtacatgcgccagagtgggaa
gatgagcctgccaaagactggttgagccgaaatttccgcaatacagaatttgtttaccgt
tctccgggacgtttatggctcggccagcgtattttacgccagctcgaagcgattcgaatg
cctgaacaggctcgtcaattgattgaagcggtctatggtgataccgcaacagaaagcatt
cccacgagtctgcaaagtcaagaagaggctctgatgggagatgagtgcgctaaagccaat
cgggcatggtctcagttgattgatttccgctacggctatcatacgaatagttcacaatac
tggacagaagatcatcaggaaattggcacccgttatagtgatgttgaaatggtcagtgtt
cttttactgaaacagactgaaaatggtcaatttggtccgtgggtcgatgatgcgcaattt
gctatcgctttgagtacggtcaaagttggtaaaaaaaagtttgctgatcatttagtgatg
ctcagtgaggtgcagactgatgccgtccatcgcgcatatccgacgaccaagtatctacaa
ctctggatgccagaaacggatccattgtttacttatgatgaaactgcaggtttttgtgcg
cagcaaaaacaggaggtgcgatga

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