Vibrio spartinae: Vspart_03937
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Entry
Vspart_03937 CDS
T07037
Symbol
nrdD
Name
(GenBank) Anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
vsr
Vibrio spartinae
Pathway
vsr00230
Purine metabolism
vsr00240
Pyrimidine metabolism
vsr01100
Metabolic pathways
vsr01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
Vspart_03937 (nrdD)
00240 Pyrimidine metabolism
Vspart_03937 (nrdD)
Enzymes [BR:
vsr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
Vspart_03937 (nrdD)
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Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_ribbon_TiaS
Zn_Tnp_IS91
Motif
Other DBs
NCBI-ProteinID:
QMV16543
UniProt:
A0ABX6R4R5
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All DBs
Position
2:559372..561492
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AA seq
706 aa
AA seq
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MKPIVIKRDGSRAAFHRDRIQAAVEAAAEHTDQELAIYALNVALAVELKLKDYKEVHIAE
IQMLVENELMQGPYKSLARSYIEYRHDRDIAREKQSALTREIEGLINESNADLLNENANK
DGKVIPTQRDLLAGIVAKHYAKTRILPRDIVQAHEAGDIHYHDLDYAPFFPMFNCMLIDL
KGMLTHGFKMGNAEIDTPKSISTATAVTAQIIAQVASHIYGGTTINRIDEILEPYVLASY
HKHLDVAHEWDIHDPEAFAATRTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS
WASRLIQISILKNRIAGLGKNHKTAVFPKLVFAIKDGLNHQAGEPNYDIKQLALDCATKR
MYPDILNYDRVVDVTGSFKTPMGCRSFLSTYEEHGELIHDGRNNLGVVSLNLPRIALQAK
GDLTRFYQILDERLLLARRALETRISRLEKVRARVAPILYMEGACGVRLEADEPIAHIFK
NGRASISLGYIGVHETINALFGDQQHVYDHQKLRDEAIKIIGYLKAATNRWAEETGYGFS
LYGTPSENLCNRFCRIDAKEFGMFDGVTDKGYYTNSFHLDVEKTVNPYDKIDFEMPYPAL
SSGGFICYGEFPNMQRNVEALENVWDYSYSRVPYYGTNTPIDECYECGYTGEFSCTSKGF
VCPKCGNHDPAKVSVIRRVCGYLGSPDARPFNFGKQEEVKRRVKHL
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccgattgtgatcaaacgcgatggctcaagagcagcgtttcatcgagacagaatt
caggctgctgttgaagcagcagccgaacatactgatcaagaactggccatctatgcctta
aatgttgcgctggctgtagagttgaagctcaaggattacaaagaagttcatattgcagaa
attcagatgttggttgagaacgaattaatgcagggcccttataaatcattggctcgttct
tacattgaatatcgtcatgatcgtgatattgcccgagagaaacaaagtgcgctgacacga
gaaattgaagggttgatcaatgaaagcaatgctgacttgctaaatgaaaatgccaataaa
gatggcaaggtgattccgactcagcgtgacttgttggctgggattgtcgcgaaacactat
gccaagactcgaattcttccccgtgatatcgtccaggcacatgaagccggcgatattcac
taccatgatctggactacgcacctttctttccgatgttcaactgtatgttgattgatttg
aaaggcatgttgacgcacggcttcaaaatgggcaatgcagaaatcgatacaccgaaatcg
atctcgacagcaacagccgtgacggcccagattattgctcaagttgccagccacatttat
ggcgggacgacgattaatcgcattgatgaaatcttggaaccttacgttctggcaagctat
cacaaacatcttgatgttgcccacgaatgggatattcacgatcccgaagcatttgcggcc
acgcggactgaaaaagagtgttatgacgcatttcaatcgctggaatatgaagtgaacacg
ctgcacactgccaatggacagactccttttgtgacgttcggttttggtctgggtaccagt
tgggcttcgcggctgattcaaatttctattttgaaaaaccggattgccggtttaggaaaa
aatcataaaaccgctgtgtttccaaaacttgtttttgcgattaaagatggcttaaaccat
caagcgggtgagccgaattatgatatcaaacaactggcgctcgactgtgcaaccaagcgg
atgtatccggatattctcaactatgaccgtgtggttgacgttaccggttcctttaaaacc
ccgatgggctgccggagtttcctcagtacctatgaagagcatggcgaattaatacatgac
ggccgcaataaccttggggtcgtgagtctgaatctgccgcggattgcattgcaggccaaa
ggggatttgacgcgcttctaccaaattcttgatgaacgtttgttactggcgcgtcgggcg
ctggaaacccgaattagccgtttagaaaaagtccgtgcgcgggttgctccgattctgtac
atggaaggtgcttgtggggtcagactggaagcggatgagccgattgctcatatctttaaa
aatggtcgggcatcgatttcactgggttatattggggttcatgaaacgatcaacgcactg
tttggtgatcaacagcatgtttatgatcaccaaaaactccgggatgaagcgataaaaatt
attggttaccttaaagcagccaccaaccgctgggcggaagaaacggggtatgggttcagt
ctgtacggtacaccgagtgaaaacttgtgtaaccgtttctgccgtattgatgccaaagag
tttgggatgttcgacggtgtaaccgataaaggttactacaccaatagtttccatctggat
gtagagaaaacggtcaatccatacgacaagattgactttgaaatgccatatccggcgctt
tcgagtggtggttttatctgttacggcgagttcccgaatatgcagcgtaatgttgaagcg
ttggagaacgtttgggattacagctacagtcgcgtgccttactacgggaccaataccccg
atcgatgaatgttatgagtgtggttataccggcgaattttcctgtaccagtaaaggattt
gtttgtccgaaatgtggtaaccatgacccggccaaagtgtccgtcatccgccgggtatgc
ggctatttaggcagccctgatgctcgaccgttcaattttggtaagcaagaagaagttaaa
cgacgagtgaagcacctataa
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