Vibrio spartinae: Vspart_04173
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Entry
Vspart_04173 CDS
T07037
Symbol
sbcD
Name
(GenBank) Nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
vsr
Vibrio spartinae
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsr03400
]
Vspart_04173 (sbcD)
DNA repair and recombination proteins [BR:
vsr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Vspart_04173 (sbcD)
Archaeal homologous recombinant proteins
Vspart_04173 (sbcD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
QMV16765
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All DBs
Position
2:822867..824000
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AA seq
377 aa
AA seq
DB search
MKFIHTSDWHLGRQFHSVSLIADQRAVLAQLVAFIEENPVDAVIVAGDIYDRSVPPTIAI
ELLNHVIHQICGTLNTPMILIPGNHDGAERLGFGAEQMKNAGLHIISDFEQMLEPVILRS
QSAGEVAFYGMPYSDPETVRAALQTSVSTHDEAHQLLAQKVREHASPTQKQVLISHCFVD
GAIESESERPLSIGGSDRVSHEHFIDFDYVALGHLHQPQQKGAAHIRYSGSLMKYSFSEQ
HHKKGFTLVELNQDGFVSAEPVELTAPHEMRILEGELNTILEQGKTDPKHLDYLLVRLMD
KHAILNPMEKLRAVYPNVLHLEKPGMLIGVEQDMASARLSRSEIDMFRDFFVEVQDCDLS
AEQERAISDIINQLTRQ
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatccatacttcagactggcaccttggccgccagtttcacagcgtttcactg
attgccgatcaaagagccgtattggcacagttggttgcttttattgaagaaaacccggtt
gatgcagtcattgttgccggtgatatctatgatcgttccgtgccgccaacaattgccatc
gaactgttgaatcacgtcatccatcagatttgtggcaccctcaatacccccatgattctc
atcccggggaatcatgatggtgccgaacggctcggcttcggggctgaacagatgaaaaat
gccggattacacattatcagtgattttgaacagatgctggaaccggtcatcctgcggagt
cagtccgccggtgaagtagctttctatggcatgccttacagtgatcctgaaaccgttcgc
gcagccttgcaaacctcagtgtcaacgcatgatgaagcccatcaattattggcccaaaaa
gtgcgcgagcacgcctcccccacccaaaaacaggtgctcatcagtcactgttttgttgat
ggggcaattgaatccgagtcagaaaggccgctctctatcgggggctcagatcgggtcagt
catgaacattttatcgatttcgattatgtcgccctcggccatctgcatcagcctcaacaa
aaaggtgccgcgcacattcgctactccggctctttaatgaagtacagcttcagtgagcag
catcataagaaaggatttacactcgttgaattgaatcaggacggttttgtgtctgccgaa
ccggtcgaacttactgcaccgcatgaaatgcgcatcctcgaaggtgaactgaacaccatt
ctcgaacagggcaagaccgatccgaaacatctcgattatctgctggtccggctgatggac
aaacacgccattctcaatccgatggagaaactacgcgcggtctatcctaatgtgctgcat
ttagaaaaaccgggcatgttaattggcgtagaacaggacatggcctcagccagattgtcc
cgcagcgagattgacatgttccgtgatttctttgttgaagtgcaagactgcgacttatcg
gcagaacaagagcgtgctatcagcgacattatcaaccaactcacccggcagtaa
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