Vibrio spartinae: Vspart_04289
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Entry
Vspart_04289 CDS
T07037
Symbol
amy
Name
(GenBank) Alpha-amylase precursor
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
vsr
Vibrio spartinae
Pathway
vsr00500
Starch and sucrose metabolism
vsr01100
Metabolic pathways
vsr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Vspart_04289 (amy)
Enzymes [BR:
vsr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
Vspart_04289 (amy)
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Gene cluster
GFIT
Motif
Pfam:
CBM26
Alpha-amylase
Alpha-amylase_C
DUF5696
Motif
Other DBs
NCBI-ProteinID:
QMV16871
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Position
2:935189..937222
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AA seq
677 aa
AA seq
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MNNKLLTGIMLCSSLWGLSPVYAQDAPKTTFVHLFEWHWSDIATECEDFLGPKGFAAVQI
SPPQKSIDNAAWWSRYQPMSYQFDSRSGNREQFKDMVSRCKAAGVDIYMDTVINHMAALN
RSFPDVPYGPNDFHNCTDNINYNNRWQVQNCDLVGLNDLKTESDYVRQKIADYMNDAISM
GVAGFRIDAAKHIPAADITAIKSKLNGNPYIFQEVIGAGGEPIQPSEYVGNGDVTEFNFA
RTLGSKFKNGHINELKELNHWSGWLPSDDAVVFVTNHDDERTNASNELTYKDQGNLYMLG
NVFMLAYPYGYPKIMSGYQFNHSDDAPPATGVHSGNACRFNGGDWICTHQWRGVANMVAF
RNVTASQQQVTHWWDNGSNQIAFGRGGLGFVVINRSDTAALDKTLSTGMPEGDYCDIISG
NFDSGNRACSGNMIHVDSQGNAMFHVSLQGAAAIHVGAKISGGTTPQPNEPVPATAVSEH
AICYYDKDTHFHQPSLYYWNVEPTGALAATSWPGVAMAKNGDFACFEPATELTTLNVIFS
DQGASKTADLTTQSGTCYFNGDWQSLRECGFSLKPGEGGNPTVQNNKVCYDNPQNFAQPY
LYFWSVEATSPVDTVSWPGVAMTAENNSYCYDFHQTLSSLNVIFSDNGSRQTADLSATPP
KLCYKDNQWHEMSACSS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaaactattaaccggaataatgctatgcagcagcctgtgggggctatcgcca
gtgtacgcacaggacgcgcccaaaacgacttttgttcatttatttgaatggcactggtca
gatattgcgacggaatgtgaagactttttggggccaaaggggttcgcggccgtccaaatt
tcgcccccgcaaaaaagtatcgataacgcagcgtggtggtctcgctatcagccgatgagc
tatcagttcgacagtcgcagtggcaatcgcgagcagttcaaagatatggtgagtcggtgt
aaagcggctggtgtcgatatctacatggataccgtcatcaaccatatggccgcgttaaac
cggagtttccccgatgtcccttatggccccaacgattttcataactgcacggacaatatt
aactacaacaatcgctggcaagtacaaaactgtgacttggtggggctgaacgacttaaaa
accgaatcagactatgtgcgacaaaaaatcgcggattatatgaatgatgccatcagtatg
ggcgttgccggtttcagaattgatgcagccaaacatattccggcagccgatattactgcg
attaaaagtaaactcaacggcaacccctacatctttcaggaagtcatcggcgccggcggc
gaaccgatccaaccttcagaatatgttggcaatggggatgtcacggaatttaactttgcc
cgcactctcggcagtaaatttaaaaacggtcacatcaacgagttaaaagaattaaatcac
tggagcggatggctccccagcgatgatgcggttgtcttcgtcaccaatcatgatgatgag
cgcaccaatgccagcaatgaactgacctataaagatcagggcaatttatacatgctcggc
aatgtcttcatgctggcctacccttacggctatccgaaaatcatgtccggttatcaattt
aaccacagcgatgatgcaccgccggcaactggggtccattcaggcaatgcctgtcgtttt
aatggcggcgactggatctgtacccatcaatggcgcggcgtcgcaaacatggtggccttc
cgcaacgtgaccgcatcacagcagcaagtcactcactggtgggataacggtagtaatcaa
atcgcattcggccgtggtgggctgggatttgtcgtgattaaccgcagtgataccgccgca
ttagacaaaactctgagcaccggcatgcctgaaggggattactgtgacattatctccggt
aatttcgattcgggtaatcgggcgtgcagcggcaatatgatacatgtcgatagtcagggc
aacgccatgtttcatgtgtctttgcaaggcgcggctgcaattcacgtcggtgctaaaatc
tcaggcggaaccacaccccaaccaaacgagccggttcctgcaacagcagtaagtgagcat
gcgatttgctactacgataaagacacccactttcaccaaccgtctctgtactattggaat
gttgagccaaccggtgcattggcagcgacaagctggcccggtgtcgcgatggcgaaaaat
ggtgactttgcttgttttgagcccgcaaccgagctgacaacactgaatgtcatcttctcg
gaccaaggcgcctcaaaaacggccgatctcaccacgcaatccggcacttgttacttcaac
ggcgactggcagtcactgcgtgagtgtggcttttcactcaaaccgggagaaggtggcaat
cccacggtgcaaaacaacaaagtgtgttatgacaacccacaaaattttgctcagccttat
ctctatttctggagtgttgaggccacctctccggtcgataccgtctcatggccaggcgtg
gcgatgaccgcggaaaacaacagctattgctatgatttccatcagacgttgtcttcactg
aatgtaattttcagtgataatggcagccgccaaaccgctgatttatcggcaacaccgcca
aagctctgttacaaggacaatcagtggcatgagatgagtgcatgtagttcttag
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