Vibrio spartinae: Vspart_04359
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Entry
Vspart_04359 CDS
T07037
Symbol
lacZ
Name
(GenBank) Beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
vsr
Vibrio spartinae
Pathway
vsr00052
Galactose metabolism
vsr00511
Other glycan degradation
vsr00600
Sphingolipid metabolism
vsr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Vspart_04359 (lacZ)
09103 Lipid metabolism
00600 Sphingolipid metabolism
Vspart_04359 (lacZ)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Vspart_04359 (lacZ)
Enzymes [BR:
vsr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
Vspart_04359 (lacZ)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
Glyco_hydro_2_N2
Glyco_hydro_72
Motif
Other DBs
NCBI-ProteinID:
QMV16937
LinkDB
All DBs
Position
2:complement(1012159..1015266)
Genome browser
AA seq
1035 aa
AA seq
DB search
MRTFQDIIASRDWQNPSVVRMHTLPAHVPLHSYRHVEDARQGTTSRRHYLNGQWAFKLYP
SPEMVEASIIDPVEDLSAWKQIDVPGNWQMQGVDHPIYTNVKYPFPDRAPEVPEQNPTGC
YACDFSVAPVAGEQTRILFEGVNSAFHLWCNGQWVGYAQDSRLPAEFDLTAYIHTGHNRL
VVMVMRWSDGSYLEDQDMWWLSGIFRDVYLYHKPAIAINDVFLRPELDALYQDGSLHVTT
KLSQQTTTHHVEVRLFDATGQPVAMQGETCCATNHNAVDEKGGWADQVEHHLTISRPRHW
NEQTPYLYRCVVMLLDAQAQVIECEAFAVGFRTVAIEDGLLKVNGKALLIRGVNRHEHHP
ETGHYVDEATMIKDILLMKQHNFNAVRTSHYPNHPRWYELCDQYGLYVVDEANIETHGQF
PMCRLSEDPQWNHAYMQRMIGLVERDKNHPSVIIWSLGNESGIGLNHHAMYQWTKQRDPS
RPIQYEGGGADTAATDIICPMYARVDQHQGGVNPKYAIKDWIGRPGEQRPLILCEYAHAM
GNSLGSFAKYWQAFRQYPRLQGGFIWDWVDQGLSQWDEHGQHYWAYGGDFGDEINDRQFC
INGLIWPDRTVHPALLEAKRAQQFYDIGFDGQHQLTLTSEHLFAEEALICCWTVLEDGVA
ISTGEHAVIMAPESARTIELPLDHGLYQSGKTYHLNVDLLLAEATFWAPARHSVAQSQFE
LKAAYSRSDAEPATPSAEIRVSESDEQVIVAVADQQWIFHRGSGYLTHWEQQGEQRLAAP
LKDHFYRAPLDNDIGTSEVDRPDPNSWMARWKQAGLDRLAGRCVAMSVEIGEHAVTIKTQ
FDYTAVAETAITEQAATTGQVLWTQWCYTINQHGELHIEVDVYPCAGLPSLPRVGFSCAL
PLTERVTWFGRGPHENYPDRCLSARIGCYDATVSEMHTPYIFPTDNGLRCDTRKLSLGGI
SVQGEFHFSVSRYSQAMLETARHTHELVADEVVYLHVDGFHMGIGGDDSWTPSVHPEFLL
DAPHYHYQVVLTAAR
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacttttcaagatattatcgcgagtcgagattggcagaatccgagcgttgtccgg
atgcatacgttgcctgctcacgtcccgctacacagctatcgtcacgtagaagatgcccgt
caggggacaacgagtcgtcgtcattatctcaatgggcaatgggcattcaaactctatcct
tctcctgagatggttgaggcatcgatcattgatccggtagaggatttatcagcatggaaa
cagattgatgttcccggtaactggcagatgcaaggggttgatcatccgatctacaccaat
gtgaaatatccgtttcctgatcgggcgccagaggttcccgagcaaaatccgacggggtgt
tatgcctgtgatttttcagtggcaccagtcgccggagagcagacccggattctatttgaa
ggggtgaattcggcatttcatttgtggtgtaacggacaatgggttggttatgcgcaagac
agccgtttgccggcagaatttgatttaacggcttatatccacaccggtcacaatcgcttg
gttgtgatggtgatgcgctggtctgacgggtcttatctggaagatcaggacatgtggtgg
ctgagcggtattttccgcgatgtgtacctgtatcacaaacctgccattgcaataaatgat
gtttttttacgtccggaactggatgccctctatcaggatggctcgctgcatgtgacgacg
aagctgagtcagcaaacgacgacgcatcacgttgaggtgcggttatttgatgccacaggc
caacctgtcgcgatgcagggggaaacctgttgcgcgaccaatcacaatgcagttgatgag
aaaggcggctgggcagatcaggtcgaacaccacttgacgatatcacgtccccgtcactgg
aatgagcagaccccttatttgtaccgctgtgtggtgatgctattggatgcgcaagcacag
gtgatcgaatgtgaagcgtttgcggtcgggttccgcacggttgccattgaagatgggtta
ctcaaagtgaatggcaaagccctgttgatccgaggcgtcaatcggcatgaacaccatccg
gaaaccggtcattatgtcgatgaagcgacgatgatcaaagatattctgttgatgaaacag
cacaactttaacgcagtgcgcacatcgcattacccgaatcatccgcgttggtatgaactc
tgtgatcagtatggtttgtatgtggtcgatgaagccaatatcgagacgcacggtcagttt
ccgatgtgtcgtttgtccgaggatccgcaatggaatcatgcctacatgcagcgcatgatt
ggattggtggaacgggataaaaatcatccgtcggtgattatttggtcattggggaatgaa
tcgggtatcggtctgaaccatcatgccatgtaccagtggaccaaacagcgtgatccgtct
cgtccgattcagtatgaaggggggggagccgatacggcggccacggatattatctgtccg
atgtatgcccgagttgaccagcatcaggggggggtgaatccgaaatatgcgattaaagat
tggattggccggcccggagagcagcggccgttaatcttgtgtgaatatgcgcatgcgatg
gggaatagtcttggaagttttgccaaatactggcaggcatttcgtcagtatccgcggcta
cagggcggatttatctgggactgggttgatcaggggctctctcagtgggatgagcatggt
cagcactattgggcgtatggcggggatttcggggatgaaatcaatgatcgtcagttttgc
attaatggcttaatctggcctgatcgcacggttcatccggcattattggaagcgaagcgg
gctcagcagttctacgatattggatttgacggtcaacatcagttgacgttgaccagtgaa
catttgtttgctgaagaggcgctgatttgttgctggacagtacttgaagacggcgtcgcc
atctcgacaggggagcacgctgtcatcatggcgcctgaatcagcgcgcacgattgaactc
ccacttgatcacggtctgtatcagtcaggaaaaacgtatcatctgaatgttgacttgctg
ctcgctgaagcaacgttctgggctccggcccgtcattcggttgcgcagtcgcagtttgag
ctgaaggccgcatattcccggtcagatgcggaaccggcaaccccatcggcagagattcga
gtctctgagtcagatgagcaggtgatcgttgcggttgcggaccaacagtggattttccat
cgtggcagcggttatctcacgcattgggagcaacagggcgagcagcgattggcggcaccg
ctgaaagatcatttctatcgtgcgccgctcgataatgatatcgggaccagtgaagttgac
aggcctgacccgaacagctggatggcgcgctggaaacaggccggtcttgatcgcttggcc
gggcggtgcgtcgcgatgagtgtagaaatcggtgagcatgctgtaacgatcaagacgcag
tttgactatactgcggtagccgagactgcgataaccgagcaggcagcgacaaccggacaa
gtgttgtggacgcagtggtgttatacgatcaatcagcacggagaactgcatattgaggtc
gatgtgtatccatgtgcgggattaccgtctctgccgcgagtcggattctcttgtgccttg
cctttgactgagcgtgtgacatggtttggccgaggcccgcacgaaaactatcctgatcgt
tgtttgtccgcccgaatcggatgttacgatgcgacggtgagcgagatgcataccccttat
attttcccaacggataatggtctgcgatgtgacacccgaaagctgtcgctgggcggtatt
tcggtgcaaggtgagtttcacttcagtgtcagccgctactcacaagcgatgcttgaaact
gccagacatacgcatgagctggtggctgatgaggtggtttacctgcatgtggatggtttc
catatgggaatcggaggcgatgattcttggacaccgagtgttcatccggaattcctgttg
gatgcaccgcactatcactatcaggtggtgttgaccgcagcgcggtaa
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integrated database retrieval system
