Virgibacillus salarius: PD280_01945
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Entry
PD280_01945 CDS
T10331
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vss Virgibacillus salarius
Pathway
vss03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PD280_01945 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vss03019
]
PD280_01945 (groL)
03110 Chaperones and folding catalysts [BR:
vss03110
]
PD280_01945 (groL)
03029 Mitochondrial biogenesis [BR:
vss03029
]
PD280_01945 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vss04147
]
PD280_01945 (groL)
Enzymes [BR:
vss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PD280_01945 (groL)
Messenger RNA biogenesis [BR:
vss03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PD280_01945 (groL)
Chaperones and folding catalysts [BR:
vss03110
]
Heat shock proteins
HSP60 / Chaperonin
PD280_01945 (groL)
Mitochondrial biogenesis [BR:
vss03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PD280_01945 (groL)
Exosome [BR:
vss04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PD280_01945 (groL)
Exosomal proteins of other body fluids (saliva and urine)
PD280_01945 (groL)
Exosomal proteins of breast cancer cells
PD280_01945 (groL)
Exosomal proteins of colorectal cancer cells
PD280_01945 (groL)
Exosomal proteins of bladder cancer cells
PD280_01945 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WBX80641
LinkDB
All DBs
Position
complement(398913..400553)
Genome browser
AA seq
546 aa
AA seq
DB search
MAKEIKFSEDARRAMLRGVDTLADAVKVTLGPKGRNVVLDKKFGSPLITNDGVTIAKEIE
LEDHFENMGAQLVSEVASKTNDVAGDGTTTATVLAQSMIREGLKNVASGANPVGVRRGIE
KAVEVAVNELKTISNPIESKESIAQVAAVSSGDSEVGSLISEAMERVGNDGVITIEESKG
FNTELEVVEGMQFDRGYASPYMVTDQDKMEAILEDPYILITDKKIGNIQEVLPVLEQVVQ
QSKPLLMIAEDVEGEALATLVVNKLRGTFNAVAVKAPGFGDRRKAMLEDIATLTGAEVIT
EDLGLDLKSATIEQLGRASKVVVTKENTTIVEGSGNPEAISSRVAQIRAQAEETTSDFDK
EKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNI
YNKVSELNLEGDEATGANIVRRAMEEPVRQIAHNAGLEGSIIVERLKGEKVGVGYNAATG
EWVNMVEAGIVDPTKVTRSALQNAASVAAMFLTTEAVVADKPEEDGGAAGGGMPDMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaaattaaattcagtgaagacgcacgtcgcgcaatgcttcgtggtgtagat
acattagcagacgcagttaaagtaacattaggaccaaaaggccgtaatgtcgttttagat
aaaaaatttggttccccattaattacaaatgatggtgtaaccatcgcaaaagaaatcgaa
ctagaagatcatttcgaaaacatgggtgcacagcttgtatcagaagttgcatctaagaca
aatgatgttgctggtgacggtacaacaactgcaactgtattagctcaatctatgattcgt
gagggacttaagaacgttgcttcaggtgctaacccagttggcgttcgtcgtggtattgag
aaagctgtagaggtagcagtgaatgaacttaaaactatttcaaatccaattgaaagtaaa
gaatctattgcccaagtagcagccgtttcatctggtgacagtgaagttggaagcttgatt
tctgaagcaatggaacgcgttggaaacgacggtgtaatcacgattgaagaatctaaaggc
tttaacacggaattagaagttgttgaaggtatgcaatttgatcgtggatatgcttctcca
tacatggttactgaccaagataaaatggaagcaattcttgaagatccatacattcttatt
acagataaaaagattggtaatatccaagaagtactacctgtacttgaacaagttgttcag
caaagcaagccactattaatgatcgctgaagatgtagagggcgaagctcttgcaacttta
gtagttaacaagcttcgtggtacgttcaacgctgtagctgtaaaagctcctggattcggt
gatcgtcgtaaagcaatgcttgaagatattgctactctaacaggtgcagaagtaattaca
gaagatcttggcttagatcttaagagtgcaacaattgagcaattaggtcgcgcatctaaa
gttgttgttacaaaagaaaacacaacgatcgtagaaggatctggaaatcctgaagcaatt
tcttctcgtgtagcacaaattcgtgcacaagctgaagaaactacttctgatttcgataaa
gaaaaattacaagaacgcttagctaaactagctggcggtgtagcagtaattaaagtcggt
gctgcaacagaaacagaattaaaagaacgcaagctacgtattgaagatgcattgaactct
acacgtgcagcagttgaagaaggtattgttgctggtggaggtactgcactagtaaatatt
tataacaaagtaagcgaacttaatcttgaaggtgacgaagcaactggtgcaaacattgta
cgtcgtgctatggaagaaccagtacgtcaaatcgcacacaatgcaggtctagaaggctct
atcattgtagaacgtctaaaaggtgaaaaagttggcgttggttacaatgcagcaactggc
gaatgggtaaacatggttgaagcaggaattgttgacccaacaaaagttactcgttctgca
ctacaaaacgcagcatctgtagcagctatgttcctaactacagaagcagtagtcgctgac
aagccagaagaagatggcggcgctgcaggcggcggaatgcctgacatgggcggcatgggt
ggaatgggcggcatgatgtag
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