Virgibacillus salarius: PD280_08895
Help
Entry
PD280_08895 CDS
T10331
Name
(GenBank) DEAD/DEAH box helicase
Organism
vss Virgibacillus salarius
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2_assoc
SNF2-rel_dom
Helicase_C
ResIII
SWIM
ERCC3_RAD25_C
TBCA_PH
SKA2
Motif
Other DBs
NCBI-ProteinID:
WBX81770
LinkDB
All DBs
Position
1696226..1699402
Genome browser
AA seq
1058 aa
AA seq
DB search
MKSIRNINVEKLFPSVIYKRGLDYYLQDKVSDLLYDINYQVWTAIVHGSENYFVEINMKD
FSKGTIDTYCDCPAFDAFGSCKHIAAVLIHIVNKDNEKFQVPKYSSYDYNMTRKFMNALH
NIPQNNNDNETALPKQTMLKVEYSCKLAFNSQLEIELKVGEKRCFVVKNAGEFLQHVSQA
SEYPMTKKFSYNPDIHTFSDVDRQILETLSAIIKNERIYHTNPFFRGDQASKRSIIIPPL
EAKALLEKLVAQSLTVETKDLTYPSVSINRDSLPFQFSLTASEQEDLQLEMEKVNDFIYL
DAYELLFSEGIFYFLQSHQVPVIEQISHFRNEGFHLPIAKKQADEFVSTVIPSLKKIGEV
AIDDKVAKDIIQVPLQAKLYLEVKAAWVVGRLEYHYGKEQIDPFSGREENEVIIIRDVEK
EQQIMRLIEHADFHYNGKELYIDMENEEEMYDFIYYMLPKLKEYVELYLTSEIRNLIVEQ
EPMTSTSVKLENASNLLDIGFDIEGINDTEVNQILEAVIEKKRYYRLDNGALLSLESDTF
SSVRRFLDGMDIEVNDLDEGKVKVPVYQGTQVDELLETSKRYDLSFRKLLHQLKSPEEQV
YPLPDTLEASLRNYQQIGYQWFKSLSHYHLGGILADDMGLGKTLQSIAYIASELCEDPHL
IVAPSSVVYNWKKEFEKFTPTLKVAVLTGSPMERRRKFSDSKNMDVWITSYATLRQDIAL
YEELSFQTLILDEAQYIKNYATKTSKAIRQIKAGRRFALSGTPIENSIDELWAIFQVILP
GLMPNHQTFKQLSYEKIAMMTRPFILRRLKRDVLNELPDKIETVHTSELTKEQKDLYVGY
HRQLQEEAAQSMNENGFQKNRMKILAGLTRLRQICCHPSLFLENYQGESGKLEQLMDTIK
NALGNGKRMLIFSQFTSMHEILIKKLDHEGIGYFYLHGQTPSHERVEISERFNNGENNVF
LISLKAGGTGLNLTGADTVILYDLWWNPAVEDQATGRAHRFGQKNVVQVIRLITEGTIEE
KIYELQQKKRELIDQVIQPGETMISSLSEDDVRELLNI
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaagtatccgaaacatcaatgttgaaaaattatttccttccgttatatataagcga
ggattagactactatttacaagataaggtaagtgatcttttatacgatattaattatcaa
gtatggactgccatcgtacacggatcggaaaattattttgtcgagattaatatgaaggat
ttttctaaaggtaccattgatacgtattgtgattgtccggcatttgacgcatttggttca
tgtaagcatatagctgcggtattaatccatatcgttaataaagacaatgagaaatttcag
gttcctaaatattcctcatatgattacaacatgactcggaaatttatgaatgcacttcat
aacattccgcaaaacaataacgacaatgaaactgcgttaccaaagcaaacgatgcttaag
gtagagtatagttgcaaattagcttttaatagtcaattggaaattgagcttaaagtggga
gaaaagcgttgttttgttgtgaaaaatgcaggtgaatttctccaacatgtttcacaagca
tcggaatacccgatgacaaaaaaattttcctataatccagatatacacactttttcagat
gtggatcggcagattttagagacattatctgccatcattaaaaatgaaagaatttatcat
accaatcctttttttagaggcgatcaagcaagtaaacgatcgattataattccaccacta
gaggcaaaagcgttgctagaaaaattagtagcgcagtcattgactgtggaaacaaaggat
ctcacgtatccatctgtatccattaatagggattcgttaccttttcaattttctttaacc
gctagtgaacaagaagatttgcaattggaaatggaaaaggtgaatgattttatctactta
gatgcctatgaattactattttctgaaggaatattttattttcttcaaagtcatcaagtt
ccagtgattgaacagattagtcatttccgtaatgaaggttttcatttaccaatcgccaag
aagcaggcagatgaatttgtttctactgttattccatcattgaaaaaaattggtgaggta
gcgatcgatgataaggtagctaaagatattattcaagtaccattacaggcaaaactctat
ttagaggtgaaggcagcatgggtcgtaggtagattagaatatcattatggaaaagaacaa
attgacccctttagtggacgtgaagaaaatgaagtcattattattcgtgatgtggaaaaa
gaacaacaaattatgcgactcatagaacatgctgattttcactataatgggaaagagctc
tatatcgatatggaaaacgaagaggaaatgtatgatttcatttattatatgcttccaaag
ctaaaggagtatgtggagctctacttaacctcagaaatacggaatctaatcgtcgaacaa
gaaccgatgacaagtacaagtgttaaattggaaaatgcatcaaatttacttgatatcggt
tttgatattgaggggataaatgacacagaggtaaatcaaatattagaggcagttattgaa
aaaaaacgctattatcgtttggataatggagcacttctttccttggaaagtgacacattt
tcatctgttagacggttcttagatgggatggatattgaggtcaatgatctggatgaaggc
aaggttaaggtgccagtgtatcaaggtacacaggtagatgagctactggaaacgagtaag
cgttatgatctatcatttcgtaaattactacatcagttaaaatctccagaagaacaagta
tacccacttccagatacgctggaggcatcacttagaaattatcagcaaattggctatcaa
tggtttaaatcattgagccattatcatttgggaggtatactagcggatgacatgggtcta
gggaagacattacaaagtatcgcatatattgcgtcagagctttgtgaagatcctcatctg
attgtggcgccttcatctgttgtatataattggaaaaaagaatttgaaaaatttacacca
acattaaaagtagctgtcttaactggatctcccatggaaagaagacgaaaattttcggat
tcaaaaaatatggatgtttggattacttcctacgcaacgttacggcaagatattgcactg
tatgaggaattatcttttcaaacactgattctcgatgaagcgcaatatataaagaattat
gctacgaaaacatcgaaagctattcggcaaattaaagcagggagacgatttgccttaagt
gggaccccaattgaaaactcgattgatgagctatgggctatcttccaagtaattctccca
ggattaatgccgaatcatcaaacatttaaacaactgtcttacgaaaaaattgctatgatg
acaagaccatttattttacgacgcctaaaacgggatgtgctaaatgagctacccgataaa
attgaaaccgtgcatacttctgagttaacgaaggagcaaaaagatttatatgtaggctat
catcgacagctacaagaagaagctgcacaatcaatgaacgaaaatggctttcaaaaaaac
cgtatgaagatacttgccggtttgacaagactaagacaaatttgctgtcacccatctcta
tttttagaaaactatcaaggggaatccggaaagctagaacaacttatggacacaataaag
aatgcattaggaaatgggaagcgtatgctaatattttctcagtttacttcgatgcatgaa
attctgattaagaagttagatcatgaagggatcggctatttttatctacatggtcagaca
ccatcgcatgaaagagttgagatcagtgagcgatttaacaatggtgaaaacaacgtgttt
ctaatttcgttaaaagccggtggaacgggacttaatttaacaggtgccgacaccgttatt
ctatatgacttatggtggaacccagcagttgaggaccaagcaacaggtcgtgctcatcgt
tttggccaaaaaaatgtagttcaagtgattcggcttattacggaaggtactattgaagag
aaaatatatgagctgcagcaaaagaaacgagaattaatcgatcaagtaatccagcctgga
gaaacgatgatatccagcttgagtgaagatgatgtcagggagctattaaatatataa
DBGET
integrated database retrieval system
