Virgibacillus salarius: PD280_17840
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Entry
PD280_17840 CDS
T10331
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vss Virgibacillus salarius
Brite
KEGG Orthology (KO) [BR:
vss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vss03016
]
PD280_17840 (truB)
Enzymes [BR:
vss01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PD280_17840 (truB)
Transfer RNA biogenesis [BR:
vss03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PD280_17840 (truB)
Prokaryotic type
PD280_17840 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Rit1_C
DUF6047
Motif
Other DBs
NCBI-ProteinID:
WBX79534
LinkDB
All DBs
Position
complement(3536311..3537204)
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AA seq
297 aa
AA seq
DB search
MDGILPLWKPKGLTSHDCVFKIRKLFHTKKVGHTGTLDPDVEGVLPICIGQATKIVPFLT
DTKKTYIAKLKLGQATDTEDATGRVIEEKEVVYRPNVQQIEEVLPSFLGEIEQVPPMYSA
VKVNGKKLYEYARANETVERPIRHVYIYELMQLSEDEQQQDTISFKVICSKGTYIRTLCV
DIGKALGYPAHMAELTREATGAFSKKNTVTFATIEEAVRNKKEADLLQPIEQGLLHLDCL
RVDRDTKQKVLHGQKLQYTYKLTTNPFTVMYQDELLAVYQIHPDNPEMMKPIRVFSR
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggatggaatcctgccattgtggaagccaaaaggcttgacatctcatgattgcgtcttt
aaaatacgtaaattatttcataccaaaaaagtaggtcatacaggtacccttgatccggat
gttgaaggggtactgcctatttgtattggacaagcaaccaaaattgttccttttttaacg
gatactaaaaaaacgtatattgccaagttaaagctcggacaagcaacagatacagaggat
gcaacaggaagagtcatcgaggagaaagaggtagtatatcgtccaaatgtgcaacaaata
gaagaagtattaccctcatttctaggggaaatcgaacaagttccccccatgtattctgct
gttaaggtaaatggtaagaagctttatgaatatgcacgcgctaatgagacagttgaaaga
ccaatacgacatgtatatatctatgagctcatgcaactttctgaagatgagcaacagcaa
gatacaatctctttcaaagtgatctgctcgaaaggaacgtacattagaactctatgtgtg
gatattggaaaagcattgggttaccctgcacatatggctgagttaactagagaggcaacc
ggtgctttttcaaagaaaaataccgtgacatttgctacaatagaggaggcggtcagaaat
aaaaaggaagccgatcttctgcagccgatcgaacaaggacttttacatcttgattgctta
cgtgtcgatcgagatacaaaacagaaagtactccatggtcaaaaactgcagtacacgtat
aaattaacgacaaatccatttacagtaatgtatcaggatgaattgttggcagtctatcag
atccatcctgacaaccctgaaatgatgaagccaattcgtgtttttagcagataa
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