Virgibacillus salarius: PD280_18590
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Entry
PD280_18590 CDS
T10331
Name
(GenBank) penicillin-binding transpeptidase domain-containing protein
KO
K08724
penicillin-binding protein 2B
Organism
vss Virgibacillus salarius
Pathway
vss00550
Peptidoglycan biosynthesis
vss01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vss00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PD280_18590
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vss01011
]
PD280_18590
Peptidoglycan biosynthesis and degradation proteins [BR:
vss01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PD280_18590
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
PBP_dimer_2
CaMKII_AD
Motif
Other DBs
NCBI-ProteinID:
WBX79654
LinkDB
All DBs
Position
complement(3684624..3686840)
Genome browser
AA seq
738 aa
AA seq
DB search
MRKNKATHFMAGIFIILFVGAFLTLSGRFLYIQATKEINGVSLEEWADKQRTSSYTLPAE
RGKIYDSNGMTLAYDRPTYRLYAIVDESYSEDLEEPKHVKDPEKTAELLAPLLDMKESEV
LEQLNAGIEKNKFQVEFGNNGKELSQQKKDEIAALDLPGINFKEEAIRYYPNGMFASQII
GFARETEVDKKDKTGTKQEIKGVAGIEHEMNDLLSGKDGRISYQRDQYNKKLLHPEEVVT
EPEDGDDVYLTIEQKIQTLLEDTLTQADEKYEPERISAVVMNPKTGEIVAMSNRPSYNPN
DPKVENWFNDVVSTPFEPGSTVKMFTWAAAIEENVYNGSEPYMSGSYQPNEQIKPVRDHN
GGNGWGKISFDKGFQRSSNVAASKLVWEKIGTDKYLEYLKAFQFDKKTEIDLPNEVAGEI
LYNWPREKLSTSFGQGSTLTPIQQMKAATAIANDGKMLQPYVIKKIVDANSGEIIEEKSP
NVVGKPISKATAEQVLELLKSVVNGEDGTGKKYKLDDYTVGGKTGTAQIPNPEGGYLSGK
ENHVFSFLGMAPIDDPELMMYVSVKQPKLEPTESGSTPVSFIFKNVMENGLHYLNINPDK
EKTNKVKQVSIPTLVGKDASKMEKELKKHGLKVTVAGQGEIVASNVREGEKVLPNDHVLL
ITEKPKMPNIVGWSLRDALQLANLLELKTETFGNGYVVTQNIKEGTPVKPKDYLGIELVP
PNQEKQENTSSDQEDTGE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaaataaagcgactcacttcatggcaggcatttttataatccttttcgtaggt
gcatttcttacattgtcaggacggtttctctacattcaagccacaaaggaaataaacgga
gtatcattggaggaatgggcagataaacaacgaacatcatcttatacattacccgcagaa
agaggaaaaatatacgatagtaatggaatgacgctggcttatgatcgacctacatataga
ttatacgccattgtagatgaatcctattccgaagatttagaggagccaaagcatgtaaaa
gatccggagaaaactgcggaattgctggctcctttattagatatgaaagaaagtgaagtg
cttgaacagttaaatgctggcatcgaaaaaaataaatttcaggttgagtttggaaataac
ggtaaagaattatctcagcagaaaaaggatgaaattgcagctttagatttgcctggaatt
aatttcaaggaagaagcaattcgctattatccaaatggaatgtttgcttcacaaattatt
gggtttgcaagagaaacagaagttgataagaaagacaaaactggtacgaaacaagaaatc
aaaggtgtagctggcattgaacatgaaatgaatgatttattaagcggtaaagatgggcgc
atatcttatcagcgtgatcaatataataaaaagctcttgcatccagaagaagttgttact
gaacctgaggatggagatgatgtttatttaacgatcgaacagaaaattcaaaccttactg
gaggatacacttacacaggcagatgaaaagtatgagcctgagcgcatttctgctgttgta
atgaatcctaaaacgggtgaaattgtggcgatgagtaatcgaccaagctataatccgaat
gatccaaaagtagaaaattggtttaatgacgttgtttctacaccgtttgaaccgggttca
acggttaaaatgtttacttgggcagcagcgatagaagagaatgtatataatggtagtgaa
ccttatatgtcaggtagctaccaacccaatgagcaaataaagcctgtgcgtgaccataat
ggaggtaacggttgggggaaaatctcatttgataagggattccaacgatcatccaatgta
gcagcttctaagcttgtatgggaaaaaattggtaccgacaaatatctagaatacttaaag
gcctttcaatttgataaaaaaacggaaattgatttacccaatgaggtagctggtgaaatt
ttatataattggccgcgtgagaagttaagtacttctttcggtcaaggtagtacgctaaca
ccaattcaacaaatgaaagctgcaacagctattgcaaatgatggaaaaatgctacagcct
tatgtgatcaaaaaaattgttgacgctaattctggagaaataatcgaagagaagtcacca
aatgtagttggcaaaccaatttctaaagcgacagctgaacaagttttagagcttttgaaa
tctgttgtaaatggagaagatgggacgggtaaaaagtataaactggatgattatacagtt
ggaggtaaaacagggacagcgcagattcctaatcctgaaggaggatatttatctggtaaa
gaaaatcatgttttttccttcttaggcatggcacccatcgatgatccggagttaatgatg
tatgtatctgttaagcagcccaagttagagccaacggaatcaggttcgacaccagtatct
tttatttttaaaaatgtaatggagaatgggcttcactatttgaatattaatcctgataaa
gagaagaccaacaaggttaaacaagtaagcatccctaccttagtaggaaaagatgctagt
aaaatggagaaagagcttaaaaagcatgggttgaaagttacggtagctggtcaaggggaa
attgtagctagtaatgtcagagaaggtgaaaaagtgttaccaaatgatcatgttttatta
ataactgaaaaaccaaagatgcctaacatcgtgggctggtcgctacgtgatgcattacag
ttagcaaatctattggaattgaaaacagagacctttggtaatggctatgttgttactcag
aatataaaggaaggtacacctgtaaagcctaaagactatttaggtattgaattagtacct
ccgaatcaagaaaagcaggaaaacacttcatcagatcaagaagatacaggggaataa
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