Virgibacillus salarius: PD280_21005
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Entry
PD280_21005 CDS
T10331
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
vss Virgibacillus salarius
Brite
KEGG Orthology (KO) [BR:
vss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vss03019
]
PD280_21005 (yhaM)
Messenger RNA biogenesis [BR:
vss03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PD280_21005 (yhaM)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
DUF3921
Motif
Other DBs
NCBI-ProteinID:
WBX80057
LinkDB
All DBs
Position
complement(4140016..4140972)
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AA seq
318 aa
AA seq
DB search
MNSDLKKGIGQVTIGDSYDGFLLIREATKGLTSNGKPFLTLILSDATGEIEAKLWDSTKE
DEATFIAEQIVKVSGEVNQFRGKAQLKILSLRPAQPTDGVHVSDFIEKAPIEKDRLIEKL
TEAIFEMQNPTLQRIVRAFIKKYQEALLIYPAAAKNHHDYASGLAHHIVSMLAIAKEMHK
LYPELNKDLLYAGIILHDIGKVKELSGVVTTTYTLEGKLLGHIPMMVEEIGMIAKEMQIE
GEEVVILQHLVLSHHGKPEWGSPKPPLVREAEILHLIDLFDAKMNMLNRALDKVNPWEFT
ERLFAMDNRSFYKPLFEE
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtgaccttaaaaaaggaattggccaagtcaccattggcgattcctatgatgga
tttctacttataagagaagctacaaaaggattaacaagtaatggaaaaccttttttgaca
cttatactaagcgacgcaacgggagagattgaagcaaagctttgggatagtacaaaagaa
gatgaagccaccttcattgctgaacaaatagtgaaagtctcaggagaagtgaatcaattt
cgcggaaaagcacagttgaaaattttgtcattacgtcctgcacagcctacagacggtgta
catgtttctgactttatagaaaaagcacctattgaaaaagatagattaatagagaagtta
acagaagctatatttgaaatgcaaaaccctacgttacaacgaatagttcgggcttttata
aagaagtatcaggaagcattactcatctatccagcagctgctaaaaatcatcatgactat
gcatcaggcttagcccaccacattgtgagtatgctagcaattgcgaaagaaatgcataaa
ttatatccagaattgaataaggatttactgtatgcgggaattatcctccatgatattggt
aaggtcaaagaattgtctggtgttgtgacaacgacatatacgctcgaaggtaaattactt
ggacatattcccatgatggtagaggaaattggaatgatagcaaaagaaatgcagattgag
ggagaggaggttgtgatcttacagcatctcgtattaagtcatcacggaaaaccagaatgg
gggagtccaaagccaccattagttcgtgaagctgaaatattgcatcttattgatttattt
gatgctaaaatgaatatgcttaatcgggcacttgataaagtgaatccatgggaatttacg
gaacggctatttgctatggacaatcgttcattctataagccgttatttgaagaataa
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