Virgibacillus salarius: PD280_21185
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Entry
PD280_21185 CDS
T10331
Symbol
sigI
Name
(GenBank) RNA polymerase sigma factor SigI
KO
K03093
RNA polymerase sigma-I factor
Organism
vss Virgibacillus salarius
Brite
KEGG Orthology (KO) [BR:
vss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vss03021
]
PD280_21185 (sigI)
Transcription machinery [BR:
vss03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PD280_21185 (sigI)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
HTH_16
HTH_DeoR
Motif
Other DBs
NCBI-ProteinID:
WBX82324
LinkDB
All DBs
Position
complement(4177108..4177836)
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AA seq
242 aa
AA seq
DB search
MMSKSLKDTPLEEMIICAQQGDQNVQNYLLKTYQPFIAKCVSEVCKRYIDPKKDDEFSIG
LSAFNEAIQSYVPERGSSFLSFAKLVIKRKVIDYIRYTQKRPVAVSLDETYDAEQMENPT
EILAVKEMYQLEQDAWYRKQEIMDFKEKLKLYKMSLAELTEVSPKHRDARESAIRTARIL
YEDQQMKEYVLAKRKLPIKDLVKKVDVSKKTLERNRKYILAIFIVLTEDYLYLKDYLKGV
GQ
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcaagtcattaaaggatactcccctagaagaaatgattatatgtgcccagcaa
ggagatcaaaacgtacaaaattatcttttaaaaacatatcaacccttcattgcgaagtgt
gtgtctgaggtatgtaaacggtatattgatccaaaaaaagatgatgaatttagtattggt
ctttccgctttcaatgaagcgatacaatcgtatgttccggaaagggggagctcgttttta
tcttttgcaaaattagttatcaagcgaaaggtaatagactatattcgttatacacaaaaa
cgtccagttgcagtatctttagatgaaacctatgatgctgaacaaatggagaatccaaca
gaaatattggctgttaaagaaatgtatcaattagaacaggatgcgtggtatcggaaacaa
gaaataatggattttaaagaaaaattaaaactgtacaagatgagcttagctgaattaaca
gaagtatctcctaagcatagagatgcgcgtgagtcagcgattcgtaccgcaagaatcttg
tatgaggatcaacaaatgaaggagtatgtattagccaaacggaagctgccaattaaggat
ttagttaaaaaagtagatgtcagtaaaaagacgttagaacgtaatagaaaatacattcta
gctatatttattgtacttacggaggactatctataccttaaagattatttgaagggggtg
ggtcagtga
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