KEGG   Virgibacillus salarius: PD280_21800
Entry
PD280_21800       CDS       T10331                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vss  Virgibacillus salarius
Pathway
vss03030  DNA replication
vss03430  Mismatch repair
vss03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vss00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PD280_21800
   03430 Mismatch repair
    PD280_21800
   03440 Homologous recombination
    PD280_21800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vss03032]
    PD280_21800
   03400 DNA repair and recombination proteins [BR:vss03400]
    PD280_21800
Enzymes [BR:vss01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PD280_21800
DNA replication proteins [BR:vss03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PD280_21800
DNA repair and recombination proteins [BR:vss03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PD280_21800
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: WBX80194
LinkDB
Position
complement(4290024..4290638)
AA seq 204 aa
MDFVSIDFETANEKRSSPCAVGIVVSDGENITDEYYSLINPMMNFRSMNIQVHGIREDDV
IDAPTFPEIWSTIHQYLSKSVVIAHNASFDMSVIRHTLDHFQLTYPEINYLFTVAISKSM
WPGLYNYKLNTLAEYHKIMFNHHNALEDARVAARVFLEAIKVSKTNSMEQFLERCHLQTG
KIYERGYHAPKMKRSRQRKQIFIK
NT seq 615 nt   +upstreamnt  +downstreamnt
atggacttcgtatctattgatttcgagacagcgaacgaaaagcgatctagtccttgtgcg
gttgggattgtcgtttcggatggagaaaatattacggacgaatattatagccttattaat
cccatgatgaattttcgttctatgaatatacaagtacatgggattagggaagatgatgta
atcgatgctccgacatttcctgaaatatggtcaacgattcatcaatatttatcaaaaagt
gtcgtgattgcacataatgctagttttgatatgagcgtgatcaggcatacgctagaccat
tttcaacttacttaccctgaaataaattatctttttacggtagctatttctaaaagtatg
tggcccggtttatacaattataaactaaatacattagcagaatatcataaaataatgttt
aaccaccataatgcattagaagatgcgagggttgcagcacgcgtgtttttagaggcgata
aaggtaagtaagacaaactcaatggagcagtttttagaacgatgtcacctacaaacagga
aaaatctatgaacgtggctatcatgcacctaaaatgaaaagatctcgacaacgtaagcag
atcttcataaaataa

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