Vitreoscilla stercoraria: LVJ81_00470
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Entry
LVJ81_00470 CDS
T08153
Symbol
ampD
Name
(GenBank) 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
KO
K03806
N-acetyl-anhydromuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
vst
Vitreoscilla stercoraria
Brite
KEGG Orthology (KO) [BR:
vst00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vst01011
]
LVJ81_00470 (ampD)
Enzymes [BR:
vst01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
LVJ81_00470 (ampD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vst01011
]
Peptidoglycan biosynthesis and degradation
Amidase
LVJ81_00470 (ampD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_2
CRAL_TRIO
Motif
Other DBs
NCBI-ProteinID:
UOO92558
LinkDB
All DBs
Position
99436..99999
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AA seq
187 aa
AA seq
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MLWKQGWYEQAVPCPSPNFGVRTRTPDLIVIHNISLPPFEYGSHSAQTLFQNQIDRNAHP
FFSVIEHLRVSSHFVIERDGCVYQCVSCDDAAYHAGVSSFHNEAACNGFSIGIELEGCDF
EPFEWAQYDSLLKLIVQLQQQYPIRAVTGHQHIAPSRKTDPGHFFDWKRLQEVGIEVDFN
ETVIIHG
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgctttggaagcaaggttggtatgagcaagctgtgccgtgtccatcacctaattttggt
gtgcgaacgcgtacacctgatttgattgtcatccacaatatttctttaccgccatttgaa
tatggttcacacagcgcgcaaactttgtttcaaaatcaaattgatcgcaacgcccatcct
tttttcagtgtgattgagcatttgcgagtgtccagccattttgtgattgagcgcgatggt
tgtgtgtatcaatgcgtcagttgtgacgatgccgcttaccatgcgggcgtgtcttctttt
cacaatgaggcggcctgtaatggtttttctattgggatagaactagaaggttgtgatttt
gagccatttgaatgggcgcaatacgacagcttgctaaagttaattgtgcaattgcagcaa
cagtatcctattcgagcggtcacagggcatcagcatattgcaccaagtcggaaaaccgat
ccgggacacttttttgattggaagcgcttgcaagaggtcgggattgaagtggattttaat
gaaacagtcatcatacatggctga
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