Vitreoscilla stercoraria: LVJ81_01550
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Entry
LVJ81_01550 CDS
T08153
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vst
Vitreoscilla stercoraria
Pathway
vst00470
D-Amino acid metabolism
vst00550
Peptidoglycan biosynthesis
vst01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vst00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LVJ81_01550 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LVJ81_01550 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vst01011
]
LVJ81_01550 (murD)
Enzymes [BR:
vst01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LVJ81_01550 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vst01011
]
Precursor biosynthesis
Amino acid ligase
LVJ81_01550 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
UOO92758
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All DBs
Position
333630..334982
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AA seq
450 aa
AA seq
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MSKPSWQNKHIVVAGLGSSGVSMLRFFQSQECTVQGYDAKLSAERRAEIAAQCPDIELVD
GSLAQVLQDADILAVSPGFPSRQPEVQAFAARGGKVVGDVEIFAQLVAQTDAKVLAITGS
NGKTTVTSLTGFLCEQSGLKTVVAGNIGLPVLDAWMQNQGQADVWVLELSSFQLDTTSSL
QASAATVLNISEDHLDRYDDLLDYAHSKTHIFTGSGVQVLNADDALCLAMARPNREVKWF
SLQKPSDYWVDVQDATLPLKAGEDMLLKAQDLALTGLHNAANALVALALCEAIGLPRAGL
LPLLTQFKGLPHRVETIGFYQDVQFIDDSKGTNVGATCAALQGLQQPIVLIAGGLGKGQD
FSPLQDALLHKARAVMLIGRDAAHIEAALQLDVPVVRCESLEAATQQGFALAQAGDAVLL
SPACASMDMFRDYAHRSEVFIEAFKELSQA
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaccatcttggcaaaataaacacattgttgtggctggcttgggcagcagtggc
gtatccatgttgcgctttttccaatctcaagaatgtacggtgcaaggttacgatgcgaaa
ttgagcgcagaacgccgtgctgagattgctgcgcaatgtcctgacattgaattggtcgat
ggcagtttggcgcaagtgttacaggacgctgatattttggcagtcagtccaggctttcca
tcgcgtcagcctgaagtccaagctttcgcagctcgtggcggcaaggttgtgggcgatgtg
gaaatttttgcacagcttgtggcgcagacagatgccaaagtgttggcgattactggctcc
aatggcaaaaccacagtgaccagtttgacgggctttttgtgcgagcaaagcggcctgaaa
acagtcgtggcaggcaatattggtttgcctgttttggatgcttggatgcaaaaccaagga
caagcagacgtttgggtcttggaattgtccagtttccaattggataccacgagcagtttg
caagcatcggcagcaacggtgttgaacatttcagaagaccatttggatcgttatgacgat
ttgctggattatgcgcacagcaaaacgcacattttcacaggcagtggtgtgcaagtgctc
aatgcggatgatgctttgtgtttggcaatggcgcgtccgaatcgtgaggtgaaatggttt
tcattgcaaaaaccgagtgattattgggtcgatgtacaggacgctactttgccactcaaa
gcgggtgaagacatgttgttaaaggcgcaagatttggctttgacaggtttacacaatgct
gcgaatgcgttggtggcgttggctttgtgtgaggcgattggtttgccgcgcgcgggtttg
ttgccattgttgacgcaattcaaaggtttgccacaccgcgtggaaaccatcggtttttac
caagacgttcaattcattgatgactctaaaggtaccaatgttggtgctacttgtgcggct
ttgcaaggcttgcaacagccgatagtgttgattgcaggcggtttgggcaaagggcaagat
ttctcacctttacaggacgctttgcttcataaagcccgcgcggtgatgttgattggtcgc
gatgcggcgcacattgaagcggcattgcaattggatgtgcctgttgtgcgttgtgaaagt
ttggaagcggcaacgcaacaaggttttgcgttggcacaagcgggcgatgcggttttgtta
agccctgcatgtgcgagcatggacatgttccgtgattatgcgcaccgttcagaagtcttt
atcgaagctttcaaagagttgtcacaagcatga
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