Vitreoscilla stercoraria: LVJ81_01740
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Entry
LVJ81_01740 CDS
T08153
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
vst
Vitreoscilla stercoraria
Brite
KEGG Orthology (KO) [BR:
vst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vst03021
]
LVJ81_01740 (rpoH)
Transcription machinery [BR:
vst03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LVJ81_01740 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
HTH_31
RNase_J_b_CASP
HTH_25
Ham1p_like
Motif
Other DBs
NCBI-ProteinID:
UOO92794
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Position
complement(374185..375045)
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AA seq
286 aa
AA seq
DB search
MNPAFALPVPSGHSTLEQYIHTVNSIPLLSAEEEHDLAERHALYDDLEAAKKMILSHLRV
VVSIARGYDGYGLNQADLIQEGNIGLMKAVKRFEPSRGVRLFSFAVHWIKAEIHEFILRN
WRLVRVATTKPQRKLFFNLRSMRKNMNALSDIEAQQIADDLGVKLSEVFEMEQRMTGKDV
ALLSDSDDDEDSFAPIDWLTDHNSEPTQILAQKAHHQLQTEGLQTALAQLDDRSRHIVES
RWLQDDSGLTLHDLASQYGVSAERIRQIEAKALQKLRGFLGEVVPA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagcttttgctttacctgtacccagcggtcattcaactttggaacagtatatt
cacacagtgaacagcattccattattgagcgcagaggaagagcatgacttggccgaacgt
catgctttgtatgatgatttagaagcggcaaaaaaaatgattttgtcgcatttacgtgtc
gttgtttctattgcacgaggctacgatggttatggtttaaaccaagcagatttgattcaa
gaaggcaatatcggtttgatgaaagccgtgaaacgcttcgagcctagccgtggtgtgcgt
ttgttttcattcgctgtgcattggatcaaagccgaaatccacgaattcattttgcgcaac
tggcgcttggtacgagtggcaactaccaagccacaacgcaaattgttcttcaatttgcgc
agcatgcgcaaaaatatgaatgctttgagcgacatcgaagcgcagcaaatcgccgacgat
ttgggcgtcaaattgtctgaggtgttcgagatggagcaacgcatgaccggcaaagatgtg
gccttgttatccgacagcgatgacgatgaagacagctttgcacccatagattggttgacc
gaccacaacagcgaaccgacacaaatcttggcgcaaaaagcccatcaccaattgcaaacc
gaaggcttgcaaactgccttggcacaattggatgaccgctcacgccacattgtcgaatct
cgttggttacaagatgatagcggcttaaccttacacgatttggccagccaatacggtgta
tctgccgaacgcattcgccaaatcgaagccaaagcattgcaaaaattgcgtggtttttta
ggcgaagtcgttccagcataa
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