Vitreoscilla stercoraria: LVJ81_02020
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Entry
LVJ81_02020 CDS
T08153
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
vst
Vitreoscilla stercoraria
Brite
KEGG Orthology (KO) [BR:
vst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vst03032
]
LVJ81_02020
03036 Chromosome and associated proteins [BR:
vst03036
]
LVJ81_02020
03400 DNA repair and recombination proteins [BR:
vst03400
]
LVJ81_02020
DNA replication proteins [BR:
vst03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LVJ81_02020
Chromosome and associated proteins [BR:
vst03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
LVJ81_02020
DNA repair and recombination proteins [BR:
vst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
LVJ81_02020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
UOO92844
LinkDB
All DBs
Position
430447..430758
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AA seq
103 aa
AA seq
DB search
MTKSELMLRLAELVSAQKGTQLVAKDVEHSVKVLVDTMTRSLAKGQRIEIRGFGSFDLNH
RPARVGRNPKTGDKVEVPEKYVPHFKPGKELRERVDQALQNCN
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatctgagttaatgttacgcttggcagagttggtttctgctcaaaaagggact
caattggtcgctaaagatgtggagcatagtgttaaagtattggttgatacgatgacacgc
tcattggctaaaggccaacgcattgaaattcgcggcttcggtagttttgatttgaaccac
cgtcctgcacgagtaggtcgtaatcctaaaacaggcgataaagtggaagtacctgagaaa
tatgtaccacactttaaacctggtaaggaattgcgcgagcgcgtggaccaagccttgcaa
aattgtaattga
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