KEGG   Vitreoscilla stercoraria: LVJ81_02085
Entry
LVJ81_02085       CDS       T08153                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vst  Vitreoscilla stercoraria
Pathway
vst03030  DNA replication
vst03430  Mismatch repair
vst03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vst00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LVJ81_02085 (dnaQ)
   03430 Mismatch repair
    LVJ81_02085 (dnaQ)
   03440 Homologous recombination
    LVJ81_02085 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vst03032]
    LVJ81_02085 (dnaQ)
   03400 DNA repair and recombination proteins [BR:vst03400]
    LVJ81_02085 (dnaQ)
Enzymes [BR:vst01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LVJ81_02085 (dnaQ)
DNA replication proteins [BR:vst03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LVJ81_02085 (dnaQ)
DNA repair and recombination proteins [BR:vst03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LVJ81_02085 (dnaQ)
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: UOO92856
UniProt: A0ABY4EC37
LinkDB
Position
443609..444334
AA seq 241 aa
MAVRQIVLDTETTGLYANQGDRLIEFAGLEMIDRRLTGKYLHEYVHPERDIAPEAIAVHG
ITLDDLADKPKFAGVAQRIADFLQDSELIIHNAAFDIGFLNMEFARLGMPETEHITGHKS
IDTVAMARRLYPGQKVNLDALCNRLGVDKTKRVLHGALIDCELLAEVYLGMTRGQFSLDV
KATDEEALHLQAAHQFERQAGMRFKVIDADEQEQAAHAAYVAVLDKSVGGESLYRQQMQD
I
NT seq 726 nt   +upstreamnt  +downstreamnt
atggcggtaagacaaattgtattggatactgaaacgacgggtctgtatgccaaccaaggc
gatcgtttgattgaatttgcaggtttggaaatgatagaccgtcgtttgacgggcaagtat
ttgcatgagtatgtacatcctgagcgtgacattgcacctgaagccattgcggtgcacggc
atcacgctggatgatttggcagacaaacccaagtttgcgggagtggcgcagcgcatagca
gactttttgcaagacagcgaactcattattcacaatgctgcgtttgacatcggctttttg
aatatggaatttgctcgcttgggcatgcctgaaaccgaacacattacaggtcacaaaagc
attgataccgtggcgatggcacgccgtttgtatccaggacaaaaagtcaatttggatgct
ttgtgcaatcgtttgggtgtggataagaccaaacgggtgttgcatggtgctttgattgac
tgcgagttattggctgaagtgtatttgggcatgactcggggtcagttcagcttggatgtg
aaagcaactgacgaagaggctttgcatttacaggccgcgcatcagtttgagcgccaagca
ggcatgcgttttaaagtcatagacgcagacgagcaagagcaagcggcacatgcagcgtat
gtggcagtattggacaagtcagtcggtggtgagagtttgtaccgacaacaaatgcaagat
atttga

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