Vitreoscilla stercoraria: LVJ81_05350
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Entry
LVJ81_05350 CDS
T08153
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vst
Vitreoscilla stercoraria
Brite
KEGG Orthology (KO) [BR:
vst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vst03016
]
LVJ81_05350 (truB)
Enzymes [BR:
vst01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LVJ81_05350 (truB)
Transfer RNA biogenesis [BR:
vst03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LVJ81_05350 (truB)
Prokaryotic type
LVJ81_05350 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UOO93457
UniProt:
A0ABY4ECI1
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All DBs
Position
complement(1088828..1089754)
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AA seq
308 aa
AA seq
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MTTSTKPPKRRINGVLLLDKPKGKSSNTALQITKRLFQAEKAGHTGVLDPLATGLLPVCF
GEATKYAQYLLDSDKAYIADLKFGIETTTGDVEGEASSTTDVRINAQQFQDACVAFTRSY
EQMPPMFSALKHNGKALYEYARQGINIERKRRTITIYQIDVLAFDEAAQTAQIAVRCSKG
TYIRTLAEDIARHAGSLAHLTDLRRTATAGFGIEHAYSIETLESLNLEQKDGLLLPCEAL
VAHLPAITLQNAEIERLQYGQQVQSDAICEIISPLRVYDDAQQFMGLIEASAEGVLKALR
LMSTQNNL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaccacctcaaccaaaccacccaaacgccgcatcaatggcgtcttgcttttggacaaa
cccaagggcaaatccagcaacaccgcgttgcaaatcaccaaacgcctgtttcaagctgaa
aaagccggtcatactggggtactagacccattggcaacgggcttattgcctgtgtgtttt
ggtgaagcgaccaaatatgcgcagtatttattggattcggacaaggcctatattgccgat
ttaaaattcggcatcgaaaccacaacaggcgatgtagaaggtgaagcatcttcaaccacc
gatgtgcgcatcaatgcccaacagtttcaggacgcttgcgtggcatttacgcgctcgtat
gaacaaatgccaccgatgttttctgctttgaaacacaatggcaaggctttgtacgaatac
gcccgccaaggcattaacattgaacgcaaacgtcgcaccatcaccatttaccaaattgat
gtgttggcgtttgacgaagcggctcaaaccgcgcaaattgctgtgcgctgctcaaaaggc
acttacattcgcaccttggctgaagacatcgcccgtcacgcaggctctttggcacatttg
accgatttgcgccgcactgccacagcaggttttggtatcgaacacgcttatagcattgaa
acattggaaagcttgaacttagagcaaaaagatggtttattgttgccatgcgaggctttg
gtggcacatttacctgccattacactgcaaaatgctgaaattgagcgcttgcaatatgga
caacaggtgcaaagcgatgcaatttgtgaaataatatcgcccttacgggtatatgacgat
gcgcagcaatttatgggcttgatcgaagcgtctgctgaaggcgtattgaaggctttgcga
ttgatgagtactcagaacaatctgtaa
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