KEGG   Vitreoscilla stercoraria: LVJ81_06540
Entry
LVJ81_06540       CDS       T08153                                 
Symbol
cas3f
Name
(GenBank) type I-F CRISPR-associated helicase Cas3f
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
vst  Vitreoscilla stercoraria
Brite
KEGG Orthology (KO) [BR:vst00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vst02048]
    LVJ81_06540 (cas3f)
Enzymes [BR:vst01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LVJ81_06540 (cas3f)
Prokaryotic defense system [BR:vst02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    LVJ81_06540 (cas3f)
SSDB
Motif
Pfam: Cas3_I-F_Cas2 Cas3-like_C_2 DEAD Cas3_HD ResIII
Other DBs
NCBI-ProteinID: UOO91332
UniProt: A0ABY4ED22
LinkDB
Position
1327784..1331155
AA seq 1123 aa
MIVTFISQCEKKALTKTRRVLDAFANRIGDRTWQTIITEEGLLAVKKLLRKTATKSTAVS
CHWIRGRRRSELLWIVGNRNQFNAEGIVPVNTTQKKLDQNKWENDWHYLPLIKSLVAVSA
LLHDWGKASVLFQEKLLDSKNRFKGDPIRHEWISCLLLHALVQSSDNPHSDEAWLTLLIE
NQWHEDLIKQVVAQYEDHTKALHGLPPLAQLIAWLIVSHHRLPDLKIENQRQSFTDTPAN
NLDQLFQLIDVDWGYQNKFDVNEYKNRLVQCFQFQQGLLSQSNGWNKQIKKWATRLKQEQ
NNVHQVLQDGSWRVVLHHARLCLMMGDHYYSSCEADKNWKTNLNLIANTNQAKQPKQFLD
EHLVGVCHNAMRVAQSLSRLADEMEPAYDVRKLKNKSPIGFEWQDHAVKEIKQFKLKNTH
HDNGWFVVNMASTGKGKTIANAKIMQALSQDQKSLRYILALGLRTLTLQTGDAYRHDLGL
SNDELAVLIGSKAIQELHQQQNALKNDVSHDELAQIGSESLEQLLDNELDYADMPQADFM
DVLFPSHQAQRNKAFLYKPVLACTIDHMMAATETKRGGKYILPSLRLSSSDLVIDEVDDF
GGQDLIAIARLIHLSAMLGRKVMISSATIPPALAEGFFNVYQQGWQLYCRFKKIQHTSIA
SMWVDEFKSHIQSTDVDISNQCIAQYSKIHDKFVSERAQFLQNQIIKHKAYIIECSDLLA
LKTQPKLDSSIQQQYFKKIQEHIEKLHHSHHSIDVQTNKRVSFGVVRIANVSPCVALTQY
LLNASWSENIEPRAMAYHSRQVLLLRSEQEHHLDVVLKRKETSGQQALAFSNPVIRQHLD
NVQAENVIFILVATPVEEVGRDHDFDWAIIEPSSYRSIIQLAGRVLRHRQLNQNVQQANI
GLLQYNLKGLHGAQVAFEKPGFEKNTAKGNFKLDTKNLSELIDLNESASINAIPRIQPNP
ILQSQKKLADLEHAVLADALTNYTQVGAKPLNSWLTQCWFLTALPQRFHPFRQSSPNIQL
FFVQQGLKLNIQMKNDLGYYINRQAYYKIHFHKPTDLEQERLWLKRNYHDILQRMATADS
ESNWNIEAKIEALSKRYGEIMLPEYDENKELMYCDQFGLTVIQ
NT seq 3372 nt   +upstreamnt  +downstreamnt
atgattgttactttcatcagccaatgtgaaaaaaaagccctcactaaaacacgtcgcgta
ttagacgcatttgcaaatcgtattggagatcgcacttggcaaaccatcatcacagaagaa
ggtttattggcagttaaaaaactgctgcgtaaaactgcgactaaaagtactgcggtcagt
tgtcattggattcgaggacgccgtcgcagcgaattgctgtggattgtcggcaatcgaaat
caatttaatgccgaaggtattgtacctgtgaacacgacccaaaaaaaattagatcaaaac
aaatgggaaaatgattggcattacttgcctttaatcaaatcactggtagcggtatcagca
cttttacatgattggggtaaagcatcagttttatttcaagaaaaattattagattccaaa
aaccgctttaaaggcgaccccatcagacatgagtggatttcatgtctgttattacatgca
ttggtccaatcttcagacaatccgcattcagatgaagcttggttaaccttattaattgaa
aaccagtggcacgaagacctgattaaacaagttgttgctcagtatgaagaccataccaaa
gctttacatggtttaccgcctttagcacaattgattgcttggctgattgtgtcacaccat
cgtttgcctgatcttaaaattgagaaccaacgtcaatcttttaccgataccccagccaat
aatttagatcaattgtttcaattgattgacgttgactggggataccaaaataaatttgat
gtcaatgaatataaaaaccgtttggttcaatgtttccaatttcaacaaggcttgctcagt
caatccaatggttggaacaaacaaattaaaaaatgggccacacgattaaaacaagaacaa
aacaacgttcatcaagttttacaggacggtagttggcgagtggtattacaccatgcacgt
ctgtgtttgatgatgggagaccattattactcttcttgtgaagctgataagaattggaaa
accaatttaaacttgattgccaataccaatcaagccaaacaaccgaaacaatttttagac
gagcatttggttggtgtttgtcacaatgccatgcgtgtggcacagtctttaagccgtttg
gccgatgaaatggagcctgcctacgatgttcgcaaactcaagaataaaagtcctataggc
tttgagtggcaggaccatgccgtcaaagaaatcaaacaattcaaactgaaaaatacccat
catgacaatggttggttcgttgtcaacatggccagtacgggcaaaggaaaaaccattgcc
aatgccaaaatcatgcaagctttgtctcaagaccagaagtcattgcgttatattttggca
ttaggtttacgtactttgaccttgcaaacaggagatgcataccgccacgatttgggtttg
agtaacgatgagttggctgtattgattggctctaaagccatacaagaattgcatcagcaa
caaaatgctttgaaaaatgatgtttcacatgatgaattggcgcaaataggttcggagtcc
ttagagcaattattggataacgaactggattatgcagacatgcctcaggcagattttatg
gatgttctgtttccatcacatcaagcccaacgcaacaaagcttttttgtacaaacccgtt
ttagcttgtaccatcgatcatatgatggcagccacagaaaccaaacgtggcggtaaatac
attttgccaagtttgcgtttgtcttcttccgatttggtcattgatgaagtggatgatttc
ggtggtcaagatttgattgcgattgctcgattaattcacttaagtgccatgttaggtcga
aaagtgatgatttcatcagcaaccattccacctgctctggccgaaggttttttcaatgtt
tatcaacaaggttggcaattgtattgtcgctttaaaaaaatccaacacaccagtattgcc
agcatgtgggtggatgagttcaaatcccatatccaatcgactgatgtggatatttctaat
caatgtattgcccaatattcaaaaatacacgataaattcgtttcagaacgagcccaattt
ttacaaaaccaaatcatcaaacacaaagcttacatcattgagtgctccgatttgcttgca
ctcaaaacacaacccaaattagacagcagcattcaacaacagtattttaaaaaaatacaa
gagcatatcgaaaagctacaccacagtcatcattcaatcgatgttcaaaccaataagcgt
gtgtctttcggagtggttcgcattgccaatgtttcgccatgtgtggccttaacacaatat
ttattgaatgcctcatggtctgaaaatattgaacctcgtgcaatggcttatcacagtcgc
caagtattgttattgagaagcgaacaagagcatcatttggatgtggtgttaaaacgcaaa
gaaacatcagggcaacaagcacttgctttttctaaccctgtgatcaggcaacatttagat
aacgttcaagcagaaaatgtaattttcatattggttgccacgcccgttgaagaagttgga
cgcgatcacgattttgattgggccatcatcgaaccgtcgtcttatcgctctattattcaa
ttagcaggtcgagtattacgacatcgccagcttaatcaaaacgtgcaacaggccaatatt
ggtctattgcaatacaatttaaaaggactacacggcgcacaagtggcttttgaaaaacct
ggctttgaaaaaaatactgccaagggcaatttcaaattagataccaaaaatctttctgaa
ttgattgatttaaatgagtctgcaagcatcaatgccattcctagaattcagcccaatcct
attttacaatcacaaaaaaaactggctgatttagagcatgctgttttggccgatgcttta
accaactacacacaagtgggtgccaaacctttgaattcttggctcacacaatgttggttt
ttaaccgccctaccacaacggtttcatccttttagacaaagcagcccaaacattcaactt
ttcttcgtacaacaaggccttaagcttaacatccagatgaaaaacgatttgggctattat
attaatcgacaagcttattacaagattcattttcataaaccaactgacttagaacaagaa
cgcttgtggctcaaacgcaattaccatgacattttacaacgcatggcaacagccgattct
gaatccaattggaatattgaagcaaaaatagaagcattgtccaaacgctatggcgaaatc
atgctgccagaatacgatgaaaacaaagaattaatgtattgcgatcaatttggtttaacc
gtgattcaataa

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