Vitreoscilla stercoraria: LVJ81_08390
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Entry
LVJ81_08390 CDS
T08153
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
vst
Vitreoscilla stercoraria
Pathway
vst03030
DNA replication
vst03430
Mismatch repair
vst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LVJ81_08390 (dnaX)
03430 Mismatch repair
LVJ81_08390 (dnaX)
03440 Homologous recombination
LVJ81_08390 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vst03032
]
LVJ81_08390 (dnaX)
03400 DNA repair and recombination proteins [BR:
vst03400
]
LVJ81_08390 (dnaX)
Enzymes [BR:
vst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LVJ81_08390 (dnaX)
DNA replication proteins [BR:
vst03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LVJ81_08390 (dnaX)
DNA repair and recombination proteins [BR:
vst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LVJ81_08390 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
AAA_22
RuvB_N
AAA_18
AAA_5
AAA_14
AAA_30
AAA_16
AAA_19
nSTAND3
ResIII
AAA_assoc_2
TIP49
Sigma54_activ_2
Mg_chelatase
Glyco_tranf_2_5
AAA_24
SKI
TsaE
Rad17
NTPase_1
AAA_28
AAA_17
PIF1
ABC_tran
DEAD
DUF815
NACHT
Herpes_Helicase
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
UOO91660
LinkDB
All DBs
Position
complement(1706292..1708205)
Genome browser
AA seq
637 aa
AA seq
DB search
MAYQVLARKWRPKKFADLVGQEHVVGALRNALAQGRLHHAYLLTGTRGVGKTTIARILAK
SLNCEHPNQGEPCGECAQCVQIDTGRHVDVVEIDAASNTGIDNIREVLENAQYAPSMGRY
KVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPQKVPVTVLSRCLQFVLRNMTP
QQVLSHLQYVLEHEHIAYQGDALNLLSRAANGSMRDALSLLDQAIALGSGQVQEATVRQM
LGAVDRQFVYALLEVLAQGNAQALTQQVQAILQEGAGFAQVLQEMALVLQQVAMVQLLPS
SVNELQDAVALQYLAQQMSPEQVQLFYQCTIHGKKDLPLAPDEQAGVMMTMLRMLALRPL
GMNDVKTTQQVVVPNQTAVQIEAAVPVSREATVPEVVAEVEPVAFVTPATPVHAVSVVEA
KAPSPETATMPTSLQAALEPDMDEVNSMLSDSHEDRPWEDMSWHETQIESVQAADTPPWE
DERPVKKSETVEMVEVVATTPVLALNADNWPHIVQHIAPQLSVARMLAQHAAFIGFDDSS
AQLQLQIAQGGKLIEERPYIAKLAEVLSAYCGRAIHVVLQDWQDTAETPHAMALRQEQEA
IAQGLAILAQDATAQQLSTLFEGNWLPESVHLKSSSH
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
gtggcttatcaagttttagcccgtaagtggcgtccgaaaaaatttgccgatttggtgggt
caagagcatgtggtcggggctttgcgcaatgctttggcgcaaggtcgtttgcatcatgct
tatttgctcacgggtacgcgcggtgtgggcaagaccactatcgctcgtattttggcaaaa
agtctgaattgtgaacatcccaatcaaggtgagccttgtggcgaatgtgcgcaatgcgtg
caaattgatacaggtcgccatgtcgatgtggtcgaaatcgatgcggcttccaatactggt
atcgacaatatccgtgaagttttggaaaacgcccaatatgcgccaagcatgggacgttac
aaagtatatattattgacgaagtacacatgttgtctaagtcggctttcaatgcgatgttg
aagactttggaagagccgcctgagcatgttaaattcattttagcgactaccgatccgcaa
aaagtacccgtaacggtattgagccgctgcttgcaatttgtgctgcgcaatatgacgccg
caacaagtgttgagccatttgcaatatgttttagagcacgaacatattgcctatcaaggc
gatgctttgaatttgttgtcgcgcgctgccaatggttctatgcgtgatgctttgagttta
ttagaccaagcgattgccttgggcagtggccaagtgcaagaagcgactgtgcgccaaatg
ttgggtgcggttgatcgccaatttgtttatgctttattggaagtattggcacaaggcaat
gcacaagcgttaacacagcaagtgcaagccattttgcaagagggtgcaggttttgcacaa
gtattgcaagaaatggccttggtgttacagcaagtggcgatggtgcaattgttgcctagc
agtgtgaatgagttacaggacgctgtggcgttgcaatatttggcgcagcaaatgagtcct
gagcaagtacaattgttttaccaatgcaccattcatggtaaaaaagatttgcctttggcg
ccagacgaacaagcaggcgtgatgatgacgatgttgcgcatgttggcgctgcgtccgttg
ggcatgaatgatgttaaaaccacgcaacaagtggttgtgcctaatcagaccgccgttcag
attgaagctgctgtgcctgtgagtcgtgaagctactgtgcctgaggtggtagcggaagtt
gagcctgtagcgtttgtgacacctgcaactcctgtccatgcggtatctgtggttgaggca
aaagcgcctagcccagaaactgcaacgatgccaacatctttacaggccgctttagagcct
gatatggatgaagtcaacagcatgttgagcgatagccatgaggacagaccgtgggaagac
atgtcgtggcatgagacgcaaatagagtctgtgcaggcagctgatacaccgccttgggag
gatgagcgtcctgtaaaaaagtctgaaacagtagaaatggttgaagttgtggccactaca
cctgtattggctttaaatgcagacaattggccccatatcgttcaacatatcgctccgcaa
ttaagtgttgcgcgtatgttggcacaacatgccgcttttattggctttgatgacagcagt
gcccaattgcaattgcaaattgcccaaggtggtaaattgatagaagagcgtccttatatt
gccaaattggcggaggtattgagcgcttattgtgggcgtgcgattcatgtggtgttgcaa
gattggcaagacacagcggaaacgccgcatgccatggcattgcggcaagaacaagaagct
attgcacagggtttggcgattttggcacaagatgcgacagcacaacaattaagtactttg
tttgagggcaattggttgcctgagagcgttcatttgaaatcgtcatctcattaa
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