Vitreoscilla stercoraria: LVJ81_08545
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Entry
LVJ81_08545 CDS
T08153
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
vst
Vitreoscilla stercoraria
Pathway
vst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LVJ81_08545 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vst03400
]
LVJ81_08545 (recC)
Enzymes [BR:
vst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LVJ81_08545 (recC)
DNA repair and recombination proteins [BR:
vst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LVJ81_08545 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UOO91685
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All DBs
Position
1737234..1740599
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AA seq
1121 aa
AA seq
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MLILHQSNRLENLAQSFASLLQNLPINGVFTPETIVIQSQGMKRYVNRFLALHNGIAANL
DFNLPARFMWKTMQQSLGQLPKVSPFSSTVLHWRLMQLFENPQFKQQNSPAAQYLSNYID
SRDEAYFDLAFILADIFDQYMVYRFDWTEAWQHNQLLGLGADEAWQADLWQQLTAQESHQ
GEHRLQVWERFLEALPTAKLPERIWVFGITSMAPMYLDLFRQLSQYTDVHIFATNPSQAY
WGDVIEPTFLLRKYESMSTEEAAQHQGHPLLASLGKQGRDFFSALTSDIEYEFSLDLFQE
NANTTLLARLQNDLLHLHSPQNHATDPTHSGLNHPDLYDGSIVMNSAHSALRELQILKDH
IIQNLAQNPTWQLHDIAVLTPQVDPYLPYLEAVFGPNCPDGKPLAYSVSDVRLSRQQPLM
QAIEQFLHLMDSRFELSDMLPLLDTPALQQRFDWDTDDVALLHTTIRELNIRWGLDDNMR
RQFGGEGDAFTWSQALERVCMGWMLPQGSSHIAWHELVPYDSEPNHWAILAQLNHLVSLL
QSYHQQWQEDTDIATWVIRLQDAIKELFLPLERDAFSLQQWQQNLQEWQQYADMAQYQGK
LSFAIVKRHISAFLQQQSQAGFLRGGITICSMVPMRGLPFQMLCLLGMNDGEFPRDTKAP
SFDLIYQDALHHRMRKGDRSRRDDDRYLFLETLLNARSQLYLSYIGKSIKNDERLAASTV
VYEFIDTIALMVGASSQDLIEGDGEQAPWITSHPLQAFSPNYFAPQAKVYSYRQDIAQAL
NAPAKHIEAFIDGAYENHLQALPTQHEDLNLHMHEWLAFWRNPTRVWLKQQLSWQDTYAQ
DAWPEQELFELDAYDSMPLYEAFYDARRQRQSLEHVAAQILQRNQVPMGKLSQLHIETIQ
KQVLSMPSEWFHAPTLPNLDHVLEHRFHDGSHVQLQLSLSHRTDCGQIFWFHKTPTAPEK
MAAWLEHLAFCAIDHSHIPKTTIIAWAENAWQWRPVNSDVAKQYLLESLILLRLGKHKPL
PFFARASLAAGEAWYKQAKKTPDDEAIIQEESRKKAYVAFAGNHFKSGQLQQEEGTNLVY
AHSEDSPLDSHLFMEVVKQMCVPMYEYIVAIEDADKETHAS
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgttgattttgcaccaatctaaccgtcttgaaaatttggcacaatcgtttgcctctttg
ctacaaaacctaccgataaatggtgtgttcacacctgaaaccatagtcattcaaagtcaa
gggatgaaacgctatgtcaaccgctttttagcattgcacaatggtattgctgccaattta
gatttcaatttgcctgcacgatttatgtggaaaaccatgcaacaaagtttgggacaattg
cccaaagtgagcccgttttcatccacagttttgcattggcgcttgatgcaattgttcgaa
aatccacaattcaaacaacaaaacagccctgccgcccaatatctgagcaattacatcgac
agccgagatgaggcgtattttgatttggcatttatcttagccgacatttttgaccaatac
atggtctatcgtttcgattggactgaggcttggcaacacaatcaattactcggcttgggc
gctgatgaagcgtggcaagccgatttatggcagcaattgaccgctcaagaaagccaccaa
ggcgaacaccgtttgcaagtgtgggagcgttttttagaagctttgcccacagccaagctg
cctgaacgcatttgggtatttggcattacttctatggcgccgatgtatttggacttgttt
cgccaattgtcacaatacaccgatgtacacatttttgcgaccaatcccagtcaagcctat
tggggcgatgtgattgaacccacttttttattgcgcaaatacgaatccatgagcactgaa
gaggcggcacaacaccaaggtcatccgctattggcatcgcttgggaaacaaggacgggat
tttttcagtgctttaaccagcgatattgaatacgaatttagcttagacttattccaagag
aacgccaatacgactttattggctcgtttgcaaaacgatttgttgcatttacacagtcct
caaaaccacgccaccgaccccacacacagcggcctgaaccatcccgatttatacgatggt
tctattgtcatgaacagcgcacacagtgctttgcgtgaattgcaaatcctcaaagaccac
attattcagaatttggcacaaaacccaacatggcaattgcacgacatcgctgttttgact
ccgcaagttgatccttatttgccttatttagaagcggtgtttggtcccaattgtcccgat
ggcaaacctttggcatattcggtttccgatgtacgtttgagccgccaacaacctttgatg
caagccattgaacagtttttacatttgatggacagccgttttgaattgtccgacatgtta
ccgttgctggatacacccgctttgcaacaacgttttgattgggataccgatgacgtcgca
ttgctgcacaccaccatccgtgaattgaacatacgttggggcttggatgacaatatgcgc
cgccaatttggtggtgaaggcgatgcgttcacttggagccaagctttagaacgggtgtgc
atgggttggatgttgccccaaggcagcagccacattgcatggcatgagttggtaccctat
gacagcgagccgaatcattgggccatcttggcgcaattgaaccacttggtcagcttatta
caaagctaccaccaacaatggcaagaagacacggatattgccacttgggtcattcgttta
caggacgctatcaaagaattgtttttaccgctagaacgtgatgcgttttctttacaacaa
tggcaacaaaatttgcaagagtggcaacaatacgccgacatggcgcaataccaaggcaaa
ttatcgtttgccattgtcaaacgccatatcagcgccttcttacaacaacaaagccaagca
gggtttttgcgtggcggcatcactatttgctcgatggtgccgatgcgtggtttgccgttt
caaatgttgtgtttgctcggtatgaacgatggcgaatttccgcgtgacaccaaagccccc
tcgtttgatttgatttaccaagatgccctccaccaccgcatgcgcaagggtgaccgttct
cgccgcgatgacgaccgctatttgttcttagaaaccttgctcaatgcccgttcgcaactg
tatttgtcttatatcggcaaaagcattaaaaatgacgaacgcttggcggcttcaacagtg
gtttatgaattcatagacaccattgcattgatggttggcgcaagcagccaagatttgata
gaaggcgatggcgaacaagcgccgtggatcacatcccatccgttacaagcattctcaccc
aattattttgcgccacaagccaaggtttacagctaccgccaagacattgcccaagctttg
aatgcgcccgccaaacacatcgaagcattcatcgatggtgcttacgaaaaccatttacaa
gccttaccgactcaacatgaagacttgaatttgcacatgcatgaatggttggcattttgg
cgcaatcccacccgtgtttggctcaagcagcaattgtcatggcaagacacctacgcccaa
gatgcttggccagagcaagaattgtttgaactagacgcctacgacagcatgccgctatat
gaggctttttatgatgcccgtcgccaacgccaatctttggagcatgtggccgcgcaaatc
ttgcaacgcaaccaagtgcctatgggcaaactcagtcaattacacattgaaaccattcaa
aaacaagttttgtctatgccaagtgaatggttccatgctccaacattgcccaacttagac
catgtcttagaacaccgctttcacgatggcagccatgtacaattgcaattgagcctcagc
catcgcaccgattgtggacagattttttggtttcataaaaccccgactgcacctgaaaaa
atggcagcttggctagagcatttggccttctgcgccatcgaccacagccacattcccaaa
accaccatcatcgcttgggcagaaaatgcttggcaatggcggcctgtaaattccgatgtg
gcaaaacaatatttactcgaaagtctgattttgttgcgtttgggcaaacacaaaccgttg
ccattttttgctcgtgcttcgcttgccgctggcgaggcgtggtacaaacaagcgaaaaaa
acacctgacgatgaagccatcatccaagaagaatcccgcaaaaaagcctatgtggcattt
gcaggcaatcatttcaaaagtggacaattgcaacaagaagaaggcaccaatttggtctat
gcccacagcgaagattcgcctttagacagccatttattcatggaagtggtcaaacaaatg
tgtgtgcccatgtacgaatacatcgtggccattgaagatgccgataaggaaacccatgca
agctga
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