Vitreoscilla stercoraria: LVJ81_08965
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Entry
LVJ81_08965 CDS
T08153
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
vst
Vitreoscilla stercoraria
Brite
KEGG Orthology (KO) [BR:
vst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vst03036
]
LVJ81_08965 (smc)
Chromosome and associated proteins [BR:
vst03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
LVJ81_08965 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_29
ABC_tran
SMC_hinge
Motif
Other DBs
NCBI-ProteinID:
UOO93728
LinkDB
All DBs
Position
1824388..1827840
Genome browser
AA seq
1150 aa
AA seq
DB search
MRLTHIKLAGFKSFVDPTTLHVPGQLVAVMGPNGCGKSNVIDAVRWVLGEASAKQLRGES
MQDVIFNGATTRKAVSRAAVELVFDNSDGRLQGAFGQYTEIAIKRVLTRQGQSTYYINNQ
VVRRRDITDLFLGTGVGARGYAVIEQGMISRIIEARPEELRAHIEEAAGVSKYKERRKET
ATRLKDTTEHLQRLADIQSELNIQVNKLNTQAQTAAQYQDLSADLQHQQNHMDFIRYREA
EASWQQAHQAQQDLQTQLDISQTQAQQLSDDLYQLQINEQVAQQHIHTLTEQRTIKREQA
TRLEMQIQHLQTNHERIIREQEQASEQLQHIEMERSNLIASAEEAYIELEELQYSHEQWQ
MQLEQLQDTQPQQQHASEDLEQAWQHQQTTLHCLERELALLTQQQQHQRQQQQQWQQRQQ
QLLQHQQALDLPTTSSLQDAQERVALLQEQVLEAENLILQHEDAQQSLQDALKQAQQQAQ
HCQQQIIAIEAKQQTIRALLPNVSNTMSDDAQILWQHMEVSEVWVHAVQTLLRERQHCRS
HAPHMVSDQPNAISWLNMPDDLPDAAILPDSLAHVIHTHATFTPAIAYWFGHIRCAPDLE
TALAQQSQLQAHEAFITPQAWWIDAVSVQALAQESEALLEHQAQLHALATQWQQWQPQTD
QAQNIVLQLQQDLDTQQQQYKQAQTQHKQWHEQLRLAHTEATQLLERTQQVQLRHNQIEQ
ELAQLQLSLNQNEQEHNQRQTQIHELQDAQEQLNLELTQLSEQRESQQHHQQQLHLQILE
VQRQQGLVALELQKRQQQNQHIQQRLQQLMQQQQHWSERQQSLALQFDDDANTDLLHTQW
QACLLQIDTLEEHIQSEQQHNQQHVATRQQLQQQQQQLDTQLPQQRAQLQQQLLLQQQAQ
WNQERYLEQLQQRGALLKDLIDLPVVSLAPLQQAIVRLNQQLQALGPVNLAALQELEQAQ
ERCDYYQNQREDVEQAMALLNDAMAQIDTETKNLFEQTFHAVNEHMQAFFPTLFGGGQAS
LKLVGEDMLEAGVAIMAQPPGKKNSTIHLLSGGEKALTAMSLVFALFSLNPAPFCLLDEV
DAPLDDANTARFCRLVEKMSQQTQFLYISHNRLTMEMAEQLIGVTMQEKGVSRIVDVDIK
QAMALTEQTI
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttacccatatcaaattggcaggttttaaatcttttgtagatccgaccacttta
cacgttccgggtcaattggttgcagtcatgggacctaatggttgcggtaaaagcaacgtc
atcgatgctgtgcgctgggttttaggcgaagcgtctgccaaacaattgcgtggcgaatcg
atgcaagacgtgattttcaatggtgctaccacccgcaaagcggtgtctcgtgctgccgta
gaattggtatttgacaacagcgatgggcgtttacagggcgcttttggacaatatactgaa
attgccatcaaacgggtgttaactcgccaaggacaatcaacgtattacatcaacaaccaa
gtggtgcgacgccgagacattaccgatttgtttttaggtacgggcgtgggtgcgcgtggt
tatgcggtgattgagcaaggcatgatttcacgcatcatcgaagcacgtcctgaagaattg
cgtgcccacatcgaagaagccgcaggcgtatccaaatacaaagaacgccgcaaagaaacc
gccacccgtttaaaagacaccaccgaacacttgcagcgtttggcagacattcaatcggaa
ttgaatattcaagtcaacaaactgaacacccaagcccaaaccgctgcccaataccaagac
ttgtctgccgacttacagcaccaacaaaatcacatggatttcatccgttaccgtgaagcc
gaagcttcatggcaacaagcgcatcaagcacaacaagatttgcaaacacaattggatatc
agccaaacacaagcgcagcaattgtcagatgatttataccaattgcaaatcaacgaacaa
gtcgcacaacaacatatccacaccttgaccgagcaacgcaccatcaagcgtgagcaagcg
acacgtttggaaatgcaaatccaacacctccaaaccaaccatgagcgcattattcgagaa
caagaacaagcatctgaacaattgcaacacattgaaatggagcgaagcaatttaatcgcc
tctgccgaagaagcgtacattgagctagaagaattacaatattcacacgaacaatggcaa
atgcagctagagcaattgcaagacactcaaccacagcaacaacacgccagcgaagattta
gaacaagcgtggcaacaccaacaaaccacgctgcactgcttagaacgtgaattggcatta
ttgacacaacagcaacaacaccagcgccaacaacagcaacagtggcaacagcgccaacaa
caattgctgcaacaccaacaagccttagatttaccgacaacaagcagcttacaggacgct
caagagcgagtggcattgttgcaagaacaggttttagaagctgaaaatctgatattacaa
catgaagatgcacaacaaagcttacaggacgctttaaaacaagcacaacaacaagcgcaa
cattgtcagcaacaaatcattgccatcgaagccaaacaacaaaccattcgtgcattattg
cccaatgtgtccaacacgatgtcggacgatgcacaaattttgtggcaacacatggaagtg
tctgaagtttgggtacatgccgtgcaaacgctgttgcgagaacgccaacattgtcgcagc
catgcaccacacatggtatccgatcagcctaacgccatcagttggctgaatatgcctgat
gacttgcccgatgctgcgatactgcctgacagtttggcgcatgtgattcatacccacgcc
accttcactcctgcgattgcctattggtttggtcatatccgctgcgctcctgatttggaa
actgctttggcgcaacaatcgcaattgcaagctcatgaagctttcatcacgccacaagct
tggtggatcgatgcggtgagtgtgcaagccttagcacaagaaagcgaagctttgctagaa
caccaagcacaactgcatgccttggcaacgcaatggcaacaatggcaaccgcaaacagac
caagcacaaaacattgtcttgcaactgcaacaagatttagacacacaacaacagcaatac
aaacaagcccaaacgcaacacaaacaatggcatgagcaattgcgtttggctcataccgaa
gcgactcagttattagaacgcacgcagcaagtacaactgcgccacaatcaaattgaacaa
gaattggcacagttgcaactctctttgaatcaaaatgaacaagagcacaatcaaagacaa
actcagattcatgagttacaggacgctcaagaacaattaaatctagaattaacgcagtta
tcagaacaacgtgaaagccaacaacaccaccaacaacaattgcatttgcaaatattggaa
gtgcaacgccaacaaggtttggtggctttggaattgcaaaaaagacaacagcaaaaccaa
cacattcagcaacgtttacagcaattgatgcagcaacaacaacattggagcgagcgccag
caaagtttggctttgcaatttgacgatgatgccaataccgatttgttacacacacaatgg
caagcatgtttgctgcaaatcgacactttggaagaacacattcaaagcgagcaacagcac
aaccaacaacatgtcgccacacgacaacagttgcagcaacaacagcaacaattggacaca
caattgccgcagcaacgagcacaattgcaacaacaattgttattgcaacaacaagcgcaa
tggaatcaagagcgttatttggagcagctgcaacaacgtggtgccctgttgaaagatttg
attgatttgcctgtggtcagcttggcaccactgcaacaagccattgtgcgtttgaaccaa
caattacaagctttgggtcctgtcaatttggccgctttgcaagagttggaacaagcgcaa
gagcgttgtgattattaccaaaatcaacgtgaagatgtggaacaagccatggctttactc
aatgatgcgatggcgcaaattgacaccgaaaccaaaaatttgtttgagcaaacattccat
gcagtgaacgaacacatgcaagcgtttttcccgactttgtttggcggtgggcaagcgagc
ttgaaattggtgggcgaagacatgctcgaagctggcgtggcgattatggcgcaaccaccg
ggcaagaaaaattcgaccattcatttgctctcaggtggagaaaaagccttgacggcaatg
tcattggtatttgcactgtttagtctcaatcctgcaccgttttgtttgcttgatgaagtc
gatgcgcctttggacgatgccaataccgcacgtttttgtcgtttggttgaaaaaatgagc
caacaaacacaatttttatacatttctcacaaccgcttgaccatggaaatggcggaacaa
ttaatcggtgtgacgatgcaagaaaaaggtgtatcacgcattgtcgatgtcgatatcaag
caagcaatggctttgaccgagcaaaccatttag
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integrated database retrieval system
