Vitreoscilla stercoraria: LVJ81_09355
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Entry
LVJ81_09355 CDS
T08153
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vst
Vitreoscilla stercoraria
Pathway
vst00260
Glycine, serine and threonine metabolism
vst00460
Cyanoamino acid metabolism
vst00630
Glyoxylate and dicarboxylate metabolism
vst00670
One carbon pool by folate
vst00680
Methane metabolism
vst01100
Metabolic pathways
vst01110
Biosynthesis of secondary metabolites
vst01120
Microbial metabolism in diverse environments
vst01200
Carbon metabolism
vst01230
Biosynthesis of amino acids
vst01240
Biosynthesis of cofactors
vst04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
vst00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LVJ81_09355
09102 Energy metabolism
00680 Methane metabolism
LVJ81_09355
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LVJ81_09355
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LVJ81_09355
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LVJ81_09355
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LVJ81_09355
Enzymes [BR:
vst01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LVJ81_09355
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
UOO91836
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Position
1921834..1923084
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AA seq
416 aa
AA seq
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MFSRSVTVASFDPELAQAIAQEVERQQDHVELIASENYVSPAVMEAQGSQLTNKYAEGYP
GKRYYGGCEFVDVAEQLAIDRLKQLFGAEFANVQPHSGSQANQAVYTSVLQPGDTIMGMN
LAHGGHLTHGASVNISGKLYKVVPYSLNDAEEIDYDEVERLAIENQPKMIVAGASAYALE
IDFKRFREIADKVGAYLFVDMAHYAGLIAAGEYPNPVPHAHFVTSTTHKTLRGPRGGIVL
TNDEALAKKINSAIFPSLQGGPLMHVIAAKAVAFKEALDPSWKDYAKQVKANAKVLAEVL
TERGLRIVSGRTESHVFLVDLRAKQITGKAAEEALGKAHITVNKNAIPNDPEKPFVTSGI
RLGTPAITTRGFDENDTRELAHLIADVLDTPNDAAALQAIAVKVTALCAKRPVYVA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgttttctcgcagtgttaccgttgcatcatttgatccagagttggcgcaagccattgcc
caagaagtagaacgtcaacaagaccacgttgaattgattgcttctgaaaactatgtttca
ccagccgttatggaagcccaaggctcacaattgaccaacaaatacgcagaaggctatcct
ggcaaacgctattatggcggttgcgagtttgtcgatgtggctgaacaattggcgattgac
cgtttgaaacaattgtttggtgctgagtttgccaatgttcaaccacattcaggctcacaa
gccaaccaagcggtttacacttcggttttgcaaccaggcgacaccatcatgggcatgaat
ttggcgcatggcggtcacttgacgcatggcgcatcggtgaatatttcgggcaaattgtac
aaagttgtgccttacagcttgaatgatgccgaagaaattgactacgatgaagtagaacgt
ttggccattgaaaaccaacctaaaatgattgtggcaggtgcttcggcttacgcgttggaa
atcgatttcaaacgcttccgcgaaattgcagacaaagtcggtgcgtatttgtttgttgat
atggcgcattacgcgggtttgattgccgctggcgaataccctaaccctgtgcctcacgcg
cactttgtgacctctaccactcacaaaaccttgcgtggtcctcgcggaggtatcgtgttg
accaatgacgaagctttggcgaaaaaaatcaactcagcgattttcccatcgttgcaaggc
ggcccattgatgcacgtgattgctgccaaagcggtggctttcaaagaggctttggatcca
tcttggaaagattacgccaaacaagtgaaagccaatgccaaagttttggctgaagtgttg
accgagcgtggtttgcgcattgtttcaggccgcaccgaaagccatgtattcttggtagac
ttgcgtgctaagcaaatcaccggcaaagcggcagaagaagctttgggcaaagcacacatc
actgtgaacaaaaacgccattcctaatgaccctgaaaaaccattcgtgacttcaggtatc
cgtttgggtacaccggccatcaccactcgtggttttgacgaaaacgacacgcgcgaattg
gctcatttgattgcggacgttttggatacaccaaacgatgctgctgcgttgcaagcgatt
gcagtgaaagtaacggctttgtgcgctaagcgtcctgtatacgttgcttaa
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