Vitreoscilla stercoraria: LVJ81_09980
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Entry
LVJ81_09980 CDS
T08153
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vst
Vitreoscilla stercoraria
Pathway
vst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LVJ81_09980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vst03400
]
LVJ81_09980
Enzymes [BR:
vst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LVJ81_09980
DNA repair and recombination proteins [BR:
vst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LVJ81_09980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
AAA_30
nSTAND6
Zn_ribbon_6
AAA_22
zf-CHY
nSTAND3
AAA_19
POTRA_2
zf-HYPF
Motif
Other DBs
NCBI-ProteinID:
UOO91956
UniProt:
A0ABY4E9G5
LinkDB
All DBs
Position
complement(2044314..2046482)
Genome browser
AA seq
722 aa
AA seq
DB search
MYWHQIAINVPLERLFTYSHPTVLPAGTLVVVSFRNRRSVGVVWAQVEELDFDAAKVLPV
LEVLADVPPLSRHWREMMDFCSRYYLYPLGQAVGAALPQGLRDKEGFVAQETKRWYRFNE
AGKTAVKEPSLSHHKKHALWQALHSQCLSLRELKQIHPQAAAQLAQYEAQGYLDVRDTPL
KMGFATEFVLNEAQEQAKTAIVATLNQFQAFLLHGITGSGKTEVYFAVMAQVLAQGQQVL
MLLPEINLTPQLLSRVQERFYGYETAVLHSQTAAGVRSQDFVRAMKGEVSLVIGTRLSVF
TPMPNLGLIVVDEEHDGSFKQQNELRYHARDVALWRAKQASCPIVLGSATPSLESWNNAK
TARFQLLSLPMRANSQATLPKVHILDVSRLPLEHGVSEPVKQALLKNWQQGGMSLVYLNR
RGFAPVLACTSCGHTFDCPNCSAKLVWHQRQNQLRCHHCDLRQAVPPFCSECHDTDLKPL
GQGTQRIEEALQEWLPHARIVRVDRDSTSGKQDWHDLYEKIQADAVDVLVGTQMLAKGHD
FARLNLVVILNADGALYSSDFRAPEHLFSQLLQVSGRAGRAETAGRVLLQTQMPEHPVFH
ALVKQDYAAFANQELALRQAYQFPPFAHMLAVRVDAPQMDMAQNLLEQILENIELPEDVS
AFGPVPMLMARLNQRERAQIFLQAPSRQSLHKAGRLFQAALLHAMPHQSQWRFALDVDVQ
DA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgtattggcaccaaatcgccatcaatgtgccgcttgagcgcttgtttacttattctcat
ccaactgtgttgcctgcgggtactttggtggtggtgtcgtttcgcaatcgtcgcagcgtt
ggtgtggtgtgggcgcaagtggaagaattggattttgatgccgccaaagtgttgcctgta
ttggaagtattggcagacgtaccgcccttaagccgtcattggcgtgagatgatggatttt
tgcagtcgttattatttgtaccctttgggtcaagctgtgggggcggcattgccacaaggc
ttgcgtgataaagagggttttgtggcgcaagaaaccaagcgttggtatcgctttaatgaa
gcaggcaaaaccgcagtcaaagaaccctcattgagccaccataaaaaacatgcattgtgg
caagctttacacagtcaatgtctgtcactgcgagaattgaaacaaatccatccacaagcg
gcagcacagttggcgcaatatgaagcacaaggctatctggatgtgcgcgacacgcctttg
aaaatgggttttgcgactgaatttgtgctcaatgaagcgcaagaacaagccaaaaccgcc
atcgtggcaacgttgaaccaatttcaagcatttttactgcatgggattacaggcagcggt
aaaaccgaagtgtattttgcagtgatggcgcaagtattggcgcagggacaacaagtgttg
atgttgttgcctgaaatcaatttgacgccgcaattattgtcccgtgtgcaagagcggttt
tatggttatgaaacggcggtattacacagtcaaactgctgcaggcgtacgcagccaagat
tttgtgcgggcgatgaaaggcgaggtgtctttggttattggcacgcgtttaagcgtgttc
acgcccatgcccaatttaggcttgattgtggtggatgaagaacatgatggttcattcaaa
cagcaaaacgaattgcgttatcatgcgcgagatgtggcgttgtggcgagccaagcaagcg
tcttgtcccattgtattgggcagcgcaacacccagtttagagtcttggaacaatgccaaa
acggcgcgttttcaattgttgtccttgccaatgcgagccaatagccaagcgactttgccc
aaggtacatattttagatgtcagtcgtttgccgttggaacatggcgtgtctgaacccgtg
aaacaagcattgctgaaaaattggcaacaaggcggtatgtctttggtgtatttaaaccgc
cgtggttttgcgcctgtattggcgtgtacctcttgtgggcatacgtttgattgtcccaat
tgttcggcaaaattggtttggcatcaacgacagaatcaattgcgttgtcatcattgtgat
ttgcgccaagctgtaccaccgttttgtagtgagtgccacgataccgacctgaaaccgctt
gggcaaggtacgcaaagaatagaagaggccttacaagaatggttgccacatgctcgcatt
gtgcgagtggatcgagacagcaccagcggcaaacaagattggcacgatttatatgagaaa
atccaagccgatgcggttgatgtgttggttggtacgcaaatgcttgcgaaagggcacgat
ttcgctcgtttgaatttggtggtgattttgaatgctgatggcgctttgtattccagtgat
tttcgtgcgcctgaacatttgttttcgcaattgttgcaagtttcaggacgagcaggtcga
gccgaaaccgcaggtcgggtgttgttgcaaacgcaaatgcctgagcatcccgtgtttcat
gctttggtgaagcaagattatgcagcgtttgccaatcaagaattggcgttgcgacaagct
taccaattcccaccgtttgcccacatgttggcggtgcgagtggatgcaccacaaatggac
atggcacaaaatttattagagcagattttagaaaatatagagctgcctgaagatgtcagt
gcatttggtcccgtaccgatgttgatggccagattgaatcagcgtgagcgcgcacaaatt
tttttacaagcgccatcgcgacaatctttacacaaagcaggacgattgtttcaggccgct
ttgctgcatgcgatgccgcatcaaagccagtggcgttttgctttggatgtggatgtacaa
gatgcttaa
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integrated database retrieval system
