Vitreoscilla stercoraria: LVJ81_10040
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Entry
LVJ81_10040 CDS
T08153
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
vst
Vitreoscilla stercoraria
Brite
KEGG Orthology (KO) [BR:
vst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vst03016
]
LVJ81_10040
Enzymes [BR:
vst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LVJ81_10040
Transfer RNA biogenesis [BR:
vst03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LVJ81_10040
Prokaryotic type
LVJ81_10040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
UOO91967
UniProt:
A0ABY4E929
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All DBs
Position
2056784..2057761
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AA seq
325 aa
AA seq
DB search
MLHWQFLGTSAGIPTKKRNVSALALGQYQRKPWLLIDCGEATQHQLLHTDWSMHHLSAIC
ITHVHGDHCYGLPGAIASASMHKRTAPLTIIAPDAVWQWLQQTIALTDMHLTYELQFIHV
EQLLHAPITLDGFVIETHALNHRVPSHAFKITYTESKRQLNLAALEHAQVPKGKTWGLLQ
QGQDVEINGHTYDSDDFVIQQQHRACVIVAGDNDTPELLQDACVDVDVLIHEATYTQEVA
DKVGSFPMHSSAKQVATFAQNTGLPNLILTHFSSRYATKTLLQPLLQEAQQFYEGQVFLA
DDFQVYHLLKNGESNRLSLFLQSHS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgttacattggcaatttttaggtacttccgctggcattccaaccaaaaaacgcaatgtc
agcgctttggcattgggtcaataccaacgcaagccgtggctgctcatcgattgtggtgaa
gcgacgcaacaccaattgctgcataccgattggtctatgcaccatttaagtgctatttgc
atcacccatgtgcatggcgaccattgctatggtttacccggtgcaattgccagcgcaagc
atgcacaaacgcaccgcacctttaaccatcatcgctcccgatgcagtatggcaatggcta
caacaaaccattgccttaaccgatatgcatttgacgtatgaattgcaatttatccatgtt
gaacaacttttgcatgcgcccataacattagatggctttgtcatcgaaacccacgctttg
aaccaccgtgtgccaagccatgcgtttaaaatcacttacaccgaatccaaacgccaattg
aatcttgccgctttagaacatgctcaagttcccaaaggcaaaacatggggcttgttgcaa
caaggtcaagatgtagaaatcaatggacacacttatgattctgatgattttgtcatccag
caacaacaccgcgcttgtgtgattgtagcgggcgacaacgacacgcctgaactgttacag
gacgcttgtgtggatgtagatgtgttgatacacgaagcgacttatacccaagaagtggcg
gacaaagtgggtagttttccgatgcacagctcagccaaacaagtggctacatttgcacaa
aacacaggtttgccaaatttgattttgacccattttagcagccgctatgccaccaaaact
ttgttacagcctttgctgcaagaagcgcaacaattttacgagggacaggtatttttggca
gacgattttcaggtataccatttacttaaaaatggcgaatctaaccgtttatcattgttt
ttgcaaagccattcatga
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