Vitreoscilla stercoraria: LVJ81_10275
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Entry
LVJ81_10275 CDS
T08153
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vst
Vitreoscilla stercoraria
Pathway
vst03030
DNA replication
vst03430
Mismatch repair
vst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LVJ81_10275
03430 Mismatch repair
LVJ81_10275
03440 Homologous recombination
LVJ81_10275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vst03032
]
LVJ81_10275
03400 DNA repair and recombination proteins [BR:
vst03400
]
LVJ81_10275
Enzymes [BR:
vst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LVJ81_10275
DNA replication proteins [BR:
vst03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LVJ81_10275
DNA repair and recombination proteins [BR:
vst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LVJ81_10275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
cpYpsA
Motif
Other DBs
NCBI-ProteinID:
UOO92007
UniProt:
A0ABY4EF17
LinkDB
All DBs
Position
complement(2107187..2108536)
Genome browser
AA seq
449 aa
AA seq
DB search
MLRHDDLHTLQQQLQFLATPIVIIDTEATGGNLYQDRLTEVALIRFDEHGIHTYEQLINP
QMTISPFIEELTGISNDMVAAAPLFEDIADELAHFLKDAVLFAHNSRFDYHFLRLAFKRC
GKQLSMPQLCTVKLSRQLYPEHFKHNLDSLIERFHIVLPQRHRAMADVAALTQFLAQASQ
ERGHLWQSALYKHITPSLLPDWLPEHLKQQLQALPDEYGMVLIWHKDAKQPKVRVCEHMY
HDMCHKLHAKQAQDWFASIVKIEGFAAIGPLDAAVMSSQYADPKQHAFYTIRLIKNDQQR
LQAKIQPLGTQITNEPPFGVFAHPKAAKKAILEWAREHGFCPKYLDILPQTLSEQTPCPI
HSSKKCHGWCPQLNEQEDIDAALRQEMTKLPIAGWQQRWPHNAQEVDLVTGQTKQWHVAG
SAIQTEDGLWLWDARVFQALKEHFRKPQA
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgttacgtcacgatgacttacataccttgcagcaacaactgcaatttttagcaaccccc
atcgtcatcatcgataccgaagccacgggtggcaatttataccaagaccgtttgaccgaa
gtggcattgattcgctttgacgaacacggcatacatacttatgagcaattgattaatcct
caaatgaccattagccctttcattgaagagcttacaggcatcagtaatgatatggtggca
gctgcacctttgtttgaggatattgcagatgaattggcacattttttaaaagatgctgtt
ttgttcgctcacaacagtcgttttgattatcattttttacgtttggcatttaaacgttgc
ggcaaacaattgagcatgccgcaattgtgcacggtgaaattgtcacgccaattgtatcct
gaacatttcaaacacaacttagacagtttgattgaacgttttcacattgttttaccgcaa
cgtcaccgcgcgatggcagatgtggcagctttaacgcaatttttggcacaagcaagtcaa
gaacgtggccatttatggcaatctgctttgtacaaacacattacaccaagcttgttgcct
gattggttgcctgagcatttgaagcaacaattacaagccttaccagatgaatatggcatg
gttttgatttggcacaaagatgccaaacagcccaaagtgcgggtgtgtgaacacatgtat
catgatatgtgtcacaaattacatgccaaacaagcccaagattggtttgccagtattgtc
aaaatagaaggttttgcggccattggaccattggatgctgcagtgatgtctagccaatat
gccgatcccaagcagcatgctttttataccatacgtttaattaagaatgaccaacagcgt
ttacaagccaaaatccaacctttgggtacgcaaatcactaacgaacctccttttggcgtc
tttgctcatcccaaagctgccaaaaaagccatcttagagtgggcgcgtgaacatggcttt
tgcccaaaatatttggatattttgccgcaaacgttgtctgaacagactccttgtcctata
cacagtagcaaaaaatgtcatggttggtgtcctcaattgaatgaacaagaagacattgat
gctgccttgcgtcaagaaatgaccaagttgcctattgcaggttggcaacaacgttggcca
cacaatgcccaagaggtggatttggtcacagggcaaaccaagcaatggcatgttgcaggt
tctgccattcaaacggaagatggtttgtggctgtgggatgcgcgggtttttcaagcttta
aaagaacattttcgcaagccacaagcttaa
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