KEGG   Vitreoscilla stercoraria: LVJ81_10530
Entry
LVJ81_10530       CDS       T08153                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
vst  Vitreoscilla stercoraria
Pathway
vst03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vst00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LVJ81_10530 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vst03400]
    LVJ81_10530 (uvrB)
DNA repair and recombination proteins [BR:vst03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LVJ81_10530 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LVJ81_10530 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR AAA_30 DEAD Kinesin Microtub_bd
Other DBs
NCBI-ProteinID: UOO92052
UniProt: A0ABY4EF65
LinkDB
Position
2153096..2155108
AA seq 670 aa
MNIIQYPDSPFSLHQPFPPAGDQPTAIQGLIEGLQDGLSMQTLLGVTGSGKTYTMANVIA
QMGRPAIIMAHNKTLAAQLYAEMRGFFPDNAVEYFVSYYDYYQPEAYVPSRDLFIEKDSS
INEHIEQMRLSATKSLMERRDVVIVATVSAIYGIGDPSEYHQMILHLKEGGKLEQRDIIA
RLVTMQYERGDMDFERSSFRVRGDVIDVFPAENSDSALRISLFDDEIESLQLFDPLTGRI
EQKLARYTVYPSSHYVTPHATVLKACETIKKELAKRIQFYNDEIRLVEAQRIEQRTRFDL
EMLYEMGFCKGIENYSRHFSRRPEGAAPPTLFDYLPKDALLFMDESHVTVPQVGAMYKGD
AARKQNLVDYGFRLPSARDNRPLKFEEFETLMPQTIFVSATPAQYEEANASQVVEQVVRP
TGLLDPILEIRPVGTQVDDLMSEITQRAAIGERVLVTTLTKRMAEQLTDYYTDLGIKARY
LHSDLDTVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSRRSL
IQTIGRAARNVNGKAILYADKITDSMQVAIDETERRRAKQIAFNAEHGITPTQIVKKVGD
LIDGVYHDDGGKKSAAKEQHFNSEEAVIKEITRLEKAMVTASRNLKFEEATELRDQIKAL
KENWLFGAAP
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgaacatcatccaatatcccgacagcccttttagcttgcatcaaccatttccccctgca
ggcgaccaacccacagccatacaaggcttgattgaaggtttacaggacggcttatccatg
caaactttgctcggggtcacaggttcaggcaaaacttacaccatggccaatgtgattgcg
caaatgggtcgtcctgccatcatcatggcgcacaacaaaactttggcagcgcaactgtat
gccgagatgcgcggcttttttcctgacaatgcagtggaatatttcgtgtcttattacgat
tattaccaacctgaagcgtatgtcccgagccgcgatttgttcattgaaaaagattccagc
atcaacgaacacatcgaacaaatgcgcctctccgccaccaaaagcttgatggagcggcgc
gatgtggtgattgtggcgacagtttccgcgatttacggcattggtgatccatcggaatac
caccaaatgattttgcatctgaaagaaggtggcaaacttgagcaacgcgacatcattgcg
cgcttggtaacaatgcaatacgagcgtggcgacatggattttgagcgcagttcgtttcgc
gtgcgcggtgatgtgattgatgtatttccagcagaaaactccgacagcgcattgcgcatc
agtttgtttgacgatgaaattgagtctttgcaattgtttgatccgttgacaggacgcatc
gagcaaaaattggcgcgttatacggtgtatccgtctagccattacgtcacgccgcacgca
accgtcctgaaagcctgtgaaaccatcaaaaaagaattggccaaacgcattcagttttac
aacgatgaaatccgtttggttgaagcgcaacgcatcgagcagcgcacgcgttttgatttg
gaaatgctgtatgaaatgggcttttgcaaaggcattgaaaactactcgcgccacttttca
aggcggcctgaaggcgcagcaccgccaactttattcgattatttgcccaaagacgcattg
ctattcatggacgaatcgcatgtgaccgtcccgcaagtgggcgcgatgtacaaaggcgac
gcggcgcgcaaacaaaacttggtcgattatggttttcgcctgccttcggcgcgtgacaac
cgtcccttaaagtttgaagaatttgaaactttgatgccgcaaaccatttttgtctctgcc
acgcccgcccaatatgaagaagcgaatgcgtcccaagtggtcgaacaagtggtgcgtccg
acaggcttactcgacccgattttagaaattcgtcccgttggcacgcaagtagacgacttg
atgagcgaaatcacgcaacgcgccgccattggcgagcgggttttggtcacgactttgacc
aaacgcatggccgaacaattgaccgattactacaccgatttgggcatcaaagcacgttat
ttgcacagcgatttggacaccgttgagcgcgttgaaatcattcgtgatttgcgtttgggc
gtgtttgatgtattggttggcatcaatttattgcgggaaggcttggacattccggaagtg
tctttggtcgcaattttggatgcggacaaagaaggctttttgcgcagccgcagaagtttg
attcaaaccataggtcgtgccgcgcgcaatgttaacggcaaagcgattttgtatgccgat
aaaatcaccgattcgatgcaagtggcgatagacgaaaccgaacgccgccgtgccaaacaa
atcgcgttcaatgccgaacacggcattacaccgacacaaattgtcaaaaaagtcggcgat
ttgattgatggtgtttaccatgatgatggtggcaaaaaatcggctgcaaaagaacaacac
tttaacagtgaagaagcggtgatcaaagaaattacccgtttggaaaaagcgatggtgacc
gcttcgcgcaatttgaaatttgaagaagctaccgaattgcgagaccaaatcaaagcttta
aaagaaaattggctatttggcgctgcaccttaa

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