Vitreoscilla stercoraria: LVJ81_11360
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Entry
LVJ81_11360 CDS
T08153
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
vst
Vitreoscilla stercoraria
Pathway
vst00220
Arginine biosynthesis
vst00240
Pyrimidine metabolism
vst00250
Alanine, aspartate and glutamate metabolism
vst01100
Metabolic pathways
vst01110
Biosynthesis of secondary metabolites
vst01240
Biosynthesis of cofactors
Module
vst_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
vst00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LVJ81_11360 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LVJ81_11360 (carB)
00220 Arginine biosynthesis
LVJ81_11360 (carB)
Enzymes [BR:
vst01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LVJ81_11360 (carB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_5
CoA_binding_2
Peptidase_S66
HTH_11
Secretin
Epimerase
Motif
Other DBs
NCBI-ProteinID:
UOO92203
UniProt:
A0ABY4EA60
LinkDB
All DBs
Position
complement(2324348..2327557)
Genome browser
AA seq
1069 aa
AA seq
DB search
MPKRTDIKTILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVVLVNSNPATIMTDPEM
ADVTYIEPIRWQTVEQIIAKERPDAILPTMGGQTALNCALDLARNGVLAKYNVELIGATE
DAIDKAEDRGRFKLAMEKIGLKCPKSFVCHTMEAALAAQAEVAYPTLIRPSFTMGGSGGG
IAYNKEEFLEICERGFDASPTHELLIEQSILGWKEYEMEVVRDKADNCIIICSIENFDPC
GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFATNPETGEMIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELSNDITGGRTPASFEPSIDYVVTKIP
RFAFEKFPAADDRLTTQMKSVGEVMAMGRTIQESMQKALRGLETGLCGFNPRSTDKAEIM
REVAVPGPERILFVADAFRIGMSLEEIFEISKIDPWFLAQLRDLIEEENKVAAGSLQDLD
YANLRRLKRKGFSDQRLSQLLNVSETAVREHRHGLKLYPVYKRVDTCAAEFATDTAYMYS
TYEEECEANPSDRKKIMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCNPETV
STDFDTSDRLYFEPLTLEDVLEIVKVEQPYGLIVHYGGQTPLKLANALVENGVNIIGTSA
DSIDAAEDRERFQQILKDLGLRQPDNRTARTNEEAIVLAEEIGYPLVVRPSYVLGGRAMQ
VVSNADELGRYMREAVSVSNDSPVLLDFFLNNAIEVDVDCISDGEQVVIGGIMQHIEQAG
VHSGDSGCSIPPYSLPQDIQDEIRRQTKEMAKALNVVGLMNVQFAVQDGVVYVLEVNPRA
SRTVPFVSKATGVPLAKIAARAMAGITLNEQEATTEVIPDYYSVKEAVFPFIKFPGVDTI
LGPEMRSTGEVMGVGVDFSEAYLKAQLGAGERIPTVGKVFLSVREQDKQYVEKTARNFQE
LGYGLCATRGTAAYLKEKGFIVQVVNKVLEGRPHIVDMIKNGDIAVVVNTVSHEAQSIQD
SHSIRRTALNNRIPLYTTIAGGEAMSEGVKSLNDTDVYSVQELHARLQK
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgtaccgatataaaaaccattttgatcattggcgcaggtccaattgtgatt
ggtcaagcgtgtgagtttgactattctggcgcacaagcatgtaaagctttgcgtgaagaa
ggttataaagtggtgttggtgaattctaatccagcgaccatcatgaccgatcctgaaatg
gctgatgtgacttacatcgagccgattcgttggcaaacggttgagcaaatcattgccaaa
gagcgtcctgatgcgattttgccaacaatgggcggtcaaacagcattgaactgtgctttg
gatttggctcgcaatggcgtgttggcgaaatacaatgtggaattgattggcgcaacagaa
gatgccatcgacaaagccgaagaccgtggtcgcttcaaattggcgatggaaaaaattggc
ttaaaatgtcctaaatcttttgtgtgtcacaccatggaagcggcattggcagcgcaagca
gaagtggcttatcctactttgattcgtccatcgttcaccatgggtggttcgggtggcggt
attgcttacaacaaagaagaatttttggaaatttgtgagcgtggttttgatgcgtctcca
acgcacgaattgttgattgagcaatcgattttgggctggaaagaatacgagatggaagtg
gtacgcgacaaagcggacaactgcatcatcatctgttcgattgaaaacttcgacccttgt
ggtgtacacacaggtgactctatcacggttgcgcctgcacaaactttgaccgacaaagaa
taccaaatcatgcgtaacgcttctttggcggtattgcgtgaaatcggtgtggacactggc
ggctctaacgtacagtttgcgaccaatcctgaaacaggcgaaatgattgtcatcgagatg
aacccacgcgtgtcacgttcatctgctttggcgtctaaagccacaggtttcccaattgcc
aaagtcgctgccaaattggcagtaggttttactttggatgaattgagcaacgacattaca
ggcggccgtacgcctgcgtcttttgaaccatcaatcgactatgttgtgaccaaaatccct
cgttttgcatttgaaaaattcccagcagccgatgaccgtttgaccacacaaatgaaatct
gtgggcgaagtgatggcgatgggtcgcacgattcaagaatcgatgcaaaaagcattgcgt
ggtttggaaacaggtttgtgtggtttcaatcctcgttcgactgacaaagcagaaatcatg
cgcgaagttgcggtgcctggtcctgagcgcattttgtttgtggctgacgcattccgtatt
ggcatgagcttggaagaaattttcgaaatcagcaaaatcgacccttggttcttggcgcaa
ttgcgtgatttgattgaagaagaaaacaaagtggcggcaggttctttgcaagacttggat
tatgctaacttgcgtcgcttgaaacgcaaaggcttctcagaccaacgtttgtcacaattg
ttgaacgtgtctgaaacagctgtgcgtgaacaccgtcatggtttgaaattgtaccctgtg
tacaaacgtgtggacacatgtgctgctgagtttgcaaccgataccgcttacatgtactca
acttacgaagaagagtgtgaagccaatccaagcgaccgcaaaaaaatcatgattttgggc
ggtggtcctaaccgtattggtcaaggcattgagtttgactactgctgtgtgcatgcggct
ttggctttgcgtgaaagcggttttgaaaccatcatggttaactgtaaccctgaaacggtt
tcaactgactttgatacttcagaccgcttgtatttcgaaccgttgactttggaagacgtg
ttggaaattgtgaaagtcgaacaaccttatggtttgattgtacattacggtggccaaaca
ccattgaaattggcgaacgctttggttgaaaacggcgtgaacatcattggtacatctgct
gacagcattgatgctgccgaagaccgtgaacgtttccaacaaatcttgaaagatttgggt
ttgcgtcaacctgataaccgcacggcacgtaccaacgaagaagcgattgtgttggctgaa
gaaattggttatccattggtcgtgcgtccatcgtatgtattgggtggtcgcgcgatgcaa
gtggtgagcaatgctgatgaattaggccgctacatgcgcgaagcggtgagcgtgtctaat
gacagcccagtgttgttggatttcttcttgaacaatgctattgaagtggatgtggattgt
atttctgacggtgaacaagtggttatcggtggcatcatgcaacacatcgaacaagcaggc
gtgcactctggtgactcaggttgctcgattccaccttactcattgccacaagacattcaa
gacgaaattcgtcgccaaaccaaagaaatggctaaggctttgaatgtggttggtttgatg
aacgtgcagtttgcggttcaagatggcgtggtgtatgtgttggaagtgaatcctcgtgct
tctcgtactgtgccgtttgtgagtaaggcaacaggcgtgccattggcaaaaattgcagcg
cgcgcgatggctggcattactttgaatgagcaagaagccaccacagaagtgattcctgac
tattacagcgtgaaagaagcagtcttcccattcatcaaattcccgggtgtcgacaccatt
ttaggtcctgaaatgcgctcaacaggcgaagtgatgggcgtgggtgtggatttctctgag
gcgtatttgaaagcacaattgggtgctggtgagcgcattccaactgtgggcaaagtattc
ttgtctgtgcgtgagcaagacaaacaatacgtggaaaaaaccgcacgcaatttccaagaa
ttgggttatggtttgtgtgctacacgtggtacagcggcttatttgaaagaaaaaggtttc
atcgtgcaagtggtgaacaaagtcttggaaggtcgcccgcacattgttgacatgattaaa
aatggcgacattgcggtcgttgtgaacaccgtttctcacgaggcacaatcgattcaagac
agccattctattcgtcgcaccgctttgaacaatcgtattcctttgtatacgacgattgca
ggtggtgaagcgatgagtgaaggtgtgaaatctttgaatgataccgatgtgtacagcgtt
caagaattgcacgcccgtttgcaaaaataa
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