Vitreoscilla stercoraria: LVJ81_12410
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Entry
LVJ81_12410 CDS
T08153
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
vst
Vitreoscilla stercoraria
Pathway
vst03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LVJ81_12410 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vst03400
]
LVJ81_12410 (mutS)
DNA repair and recombination proteins [BR:
vst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LVJ81_12410 (mutS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
MutS_C
nSTAND_NTPase5
CcmD
AAA_29
Motif
Other DBs
NCBI-ProteinID:
UOO92386
UniProt:
A0ABY4E9F6
LinkDB
All DBs
Position
complement(2530843..2533434)
Genome browser
AA seq
863 aa
AA seq
DB search
MSAKPTVSPMMLQYLSLKQHHPDKLMFYRMGDFYELFFDDASKAAQLLDITLTSRGQYEG
EPIKMAGVPFHAAEQYLAKLVKLGESVAIVEQVGEVGASKGPVERKVVRVVTPGTLTDSA
LLDDKDSNRIVAIAKHKKAWAVAWASLQSGEFRCQLCAADHIVHVLGRLEPAEILIADGH
GLDLGVFAKITTRLHAWQVEADAGRGQILRYYQIQDLHGLGLEDEAYLPAVAAAGALLNY
IQMTQSQMPQHLEALQCESHSQYIQIDAASRRNLEISQTLSGKAAPTLLSRMDVCATHMG
SRLLHQWLHQPLTHKAEIVLRQQAVVALLAHYTWLQDAFKPIADIERITARIAVGSARPR
DLAGLRDSLSVLAHLAWPEKCTSELLTNLQTVLPQGLAIAARLQAAILPEPAVWLRDGGV
INDGFDAHLDDLRHVQNHGDEFLQALEARERERTGLSTLKVEFNRVHGFYIELSKAQAES
APSDYQRRQTLKNVERYITPELKSFEDKVLTAQDQALALEKKLFDALVLELQDALSLLQQ
LAKATATLDVLASLAAVAAQDGWVVPQLLDFPCIDIQQGRHPVVAAQVTQFIANDAQLDS
KRRLMLLTGPNMGGKSTFMRQTALLVLLAHVGSLVPAQSARIGMVDQIFTRIGASDDLAG
NRSTFMVEMSESAYILNHATEKSLVLMDEVGRGTSTFDGLALAQSIAEYLLQKNKSLTLF
ATHYFELTKLPERFQDAFNMHLNALEQGQDIVFLHQVQAGPASKSYGVAVAKLAGLPNKA
LHSAQQYLQQLEQQQREQQAQLGLFQEWEPDAQITVDEHVDTTCIPNEYLACIEALQQLQ
ADELTPKAALDVIYQLQALLPQA
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaagcccactgtttcgccaatgatgcttcaatatttgtctttgaaacaacat
catcccgataaattgatgttttatcgcatgggtgatttttatgaattgttttttgatgat
gcatccaaagcagcccaattgttagacatcacgttgaccagtcgtggtcaatatgaaggt
gagccgattaaaatggcgggtgtgccgtttcatgccgcagagcagtatttggccaaattg
gtgaagctgggcgaatctgttgcgattgtggaacaagtgggggaagtgggtgcaagtaaa
ggacctgttgagcgcaaagtggtgcgtgtggtgacaccaggtactttgaccgacagtgct
ttgttggacgacaaagacagcaatcgcattgtggccatagctaaacacaaaaaagcttgg
gcagtggcatgggcttcgttgcaaagtggtgaatttcgttgccaattgtgtgcagctgac
catattgtgcatgtgttgggacgcttggagcctgctgagattttgattgcggatggtcat
ggtttggatttgggtgtttttgccaaaatcacgacccgtttgcatgcttggcaagtagaa
gccgatgcaggtcgtgggcagattttgcgctattaccaaattcaagatttacatggtttg
ggtttagaagatgaagcctatttgcctgcggtggcggctgcgggagctttgctcaattac
attcaaatgacccaatcgcaaatgccgcagcatttagaagccttgcaatgcgagtcacac
agtcaatacattcaaattgatgctgccagccgtcgcaatttagaaatcagccaaaccttg
agcggcaaagctgccccgactttattgtcgcgtatggatgtgtgtgccacacacatgggc
agccgtttattgcatcagtggttgcatcagccgttaacgcacaaagcggagattgtattg
cgtcaacaagctgtggtggctttgttggcacattacacatggttacaggacgcttttaaa
cccattgcagacatcgagcgtatcacagcacgcattgccgttggcagtgcgcgtccacga
gatttggcaggattgcgtgacagtttatcggtgttggcacatttggcttggcctgaaaaa
tgcaccagcgaattactcaccaatttgcaaacggtattgccacaaggcttggctatcgca
gcccgtttacaggccgctatcttgcctgagcctgctgtgtggttgcgtgatggtggtgtc
atcaatgatggttttgatgctcatttggatgatttgcgccatgtacaaaatcatggtgat
gaatttttacaagcattggaagcacgagaacgtgagcgcacgggtttatcgacgctgaaa
gtggaattcaatcgggtacatggtttttacattgaattgagcaaggcgcaagctgagtct
gcaccaagcgattaccagcgtcgtcaaactttgaaaaatgttgaacgctatatcacacct
gaattaaaatcgtttgaagacaaagtgttgactgcgcaagatcaagctttggcgttagag
aaaaaactgtttgatgcgttggtgctagagttacaggacgctttgagtttattgcagcaa
ttggcgaaggcaacggcaactttggacgtgttggcaagtttggcggctgtggcggcgcaa
gacggatgggttgtaccacaattattagattttccgtgtatcgacattcagcaaggtcgt
catcctgtggtggcggcacaagtgacacaatttatcgccaatgatgcgcaactcgatagc
aaacgccgtttgatgttgttaacaggtcccaatatgggtggtaaatcgacgttcatgcgt
caaacggctttgttggtattgcttgctcatgtcggttctttggtgcctgcgcagtctgct
cgcattggtatggtcgaccaaatttttacccgtattggcgcatccgatgatttggcgggc
aatcgctcgactttcatggtggaaatgtcggagtcggcttatattttgaatcatgccacg
gaaaaatcgttggtattgatggacgaagtggggagaggtacatccacatttgatggcttg
gcgttggcgcaatcgattgccgaatatttgctacaaaaaaacaaatcgctgactttgttt
gccacacattattttgaattaaccaagctgcctgaacgctttcaggacgcttttaacatg
catttgaatgctttggaacaaggacaagacattgtgttcttgcaccaagttcaagcagga
cctgccagcaaaagttatggcgtggcggtggcaaaattggcaggtttgccgaataaagct
ttacattctgcacagcaatatttacaacaattagagcaacaacagcgtgaacaacaggca
caattgggcttgttccaagagtgggaacctgatgctcaaatcacagtcgatgagcatgtt
gatacaacttgtattcctaatgaatatttagcttgtatcgaagccttacaacaattgcaa
gccgatgagctcacccctaaagctgctttggatgtgatttaccaattgcaagcattgctg
cctcaagcataa
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