Vitreoscilla stercoraria: LVJ81_12635
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Entry
LVJ81_12635 CDS
T08153
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vst
Vitreoscilla stercoraria
Pathway
vst03420
Nucleotide excision repair
vst03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LVJ81_12635
03430 Mismatch repair
LVJ81_12635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vst03400
]
LVJ81_12635
Enzymes [BR:
vst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LVJ81_12635
DNA repair and recombination proteins [BR:
vst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LVJ81_12635
MMR (mismatch excision repair)
Other MMR factors
LVJ81_12635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
UOO92431
LinkDB
All DBs
Position
complement(2574626..2576821)
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AA seq
731 aa
AA seq
DB search
MDTSLLNGLNAEQLAAVTWPPAAALVLAGAGSGKTRVLTTRIAWLLDTEQASVHSIMAVT
FTNKAAKEMRSRLSSMVENAIAAMWLGTFHGLCHRFLRTHYQDARLPSTFQILDSGDQAS
VIKRLLKSLNIAEESLAPKTLQYFINSNKEAGLRASDLNAHDKTTRQLIECYQAYDALCQ
QEGMVDFAELMLRSYEVLLHNAAIRTHYQQRFNHILVDEFQDTNNLQYKWLKLLAGDSAA
VFAVGDDDQSIYAFRGANVGNMQTLMQDFGIREPLKLEVNYRSVGHILTAANTLIANNSG
RLGKNLRLPESKQGEQGQKLRLYVADSDFLEADFVVSETKERMKEGVALDNMAVLYRSNA
QSRVLEQALFAASVPYKIYGGLRFYERQEIKHALAYLRLAVQPQDDQSVLRVINMPPRGI
GARTIEAVQAVAHDRQSSLWEALQFLITEPANRKLKAFVDLIEQLQAQAKGLELTETITA
ALDLSGLLEYYKTQKGDHQDRIDNLQELVSAAMVFNSADVQTEEWVKTDDGLWPLVAFLS
NASLEAGERQAGEGEAALQLMTIHAAKGLEFDTVFLTGLEEGLFPSEYSLQERGGLEEER
RLMYVAITRARERLYLSAAQQRLLHGRTNYSMSSRFMDELPDDVLQFLSSHRKKRQETLK
IRQEPFIHAKRAKETFDGFVIGQNVRHEKFGMGVIMDAKHKGEHATLSINFGANGLKNLS
TQFAILEVVHR
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggatacttcattactcaatggcttgaatgccgaacaattggctgcggtaacgtggccg
cctgctgctgctttggtgctcgctggtgcgggcagtggtaaaacccgcgtcttgactacg
cgcattgcatggttactcgataccgaacaagcgagtgttcacagtattatggcggtgacg
tttacgaataaagcggctaaagaaatgcgaagccgtctcagttctatggtagaaaatgcc
attgctgcgatgtggttaggcacgtttcacggtttgtgccaccgatttttacgcacgcat
tatcaagatgcgcgcttgccaagtacgtttcaaattttggacagcggtgatcaagcttcc
gtcatcaaacgtttattgaagagtttgaatattgcggaagaaagcttggctcccaagact
ttgcaatatttcattaacagcaataaagaagcaggtttgcgagcaagcgacctgaatgct
catgacaaaaccacacgccaattgattgaatgttatcaagcttatgatgcattgtgccaa
caagaaggtatggtggattttgcagaattgatgttgcgcagctatgaagtcttgcttcac
aacgccgccattcgaactcattaccaacaacgttttaatcatattttggtggatgagttt
caagataccaataatttgcaatacaaatggttgaaattgttggcaggcgattcggcagcg
gtgtttgccgtcggcgatgatgaccaaagcatttatgcatttcgtggtgcgaatgtgggc
aatatgcaaactttgatgcaagattttggcattcgtgagccattgaagttggaagtcaat
taccgttcggtgggtcatattttgactgctgccaatactttgattgccaataacagcggt
cgtttgggtaaaaatttgcgcttgcctgaaagcaaacaaggtgaacaagggcagaagctg
cgtttgtatgtggcggacagtgattttctagaagccgattttgtggtcagtgaaaccaaa
gagcgcatgaaagaaggcgtggctttggacaatatggcggtgttgtatcgcagcaatgca
caatcgcgtgttttggaacaagctttgtttgcggcgagcgtgccgtataaaatttatggt
ggtttgcgtttttatgagcgccaagaaatcaaacacgctttggcgtatttgcgtttggcg
gtgcagccacaagacgatcagtcggtgttgcgtgtgattaatatgccgccacgaggcatt
ggggcgcgcacgattgaggcagttcaggccgttgcgcatgacagacaatcgagtttgtgg
gaagcattacaatttttgattaccgagcctgccaatcgcaagctcaaagcttttgtagac
ttgattgaacaattgcaagcacaagccaaaggtttggaattgacggaaaccattactgct
gctttggatttgagtggtttgcttgagtattacaaaacccaaaaaggcgaccatcaagac
cgtatcgataatttacaagagttggtcagtgcagcgatggtgtttaacagtgccgatgta
caaacagaggaatgggtgaaaaccgatgatggtttgtggccattggtggcatttttgagt
aatgcatcgttagaagcgggtgagcgtcaagctggagagggcgaggcagctttgcaattg
atgacgatacatgctgccaaaggtttggaatttgatacggtgtttttaactggtttggaa
gaaggtttatttccaagtgagtattctttgcaagagcgcggcggtttagaagaagaacgc
cgtttgatgtatgttgccattacacgtgcccgtgagcgtttgtatttgagtgcggcacaa
caacgcttgctacatgggcgcacgaattattctatgtcttcacgttttatggatgagttg
cctgatgatgtgttgcaatttttatcgagccatcgcaaaaaaagacaagaaacattgaaa
atacgccaagaacctttcatccatgccaaacgtgccaaagaaactttcgatggttttgtg
attggacaaaatgtgcgtcatgaaaaatttggtatgggtgtcattatggatgctaaacac
aagggagaacatgccactttgagcattaattttggtgccaatggtctgaaaaacctcagt
actcaatttgccattttagaagtcgttcatcgttaa
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