Varunaivibrio sulfuroxidans: P3M64_00060
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Entry
P3M64_00060 CDS
T08892
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
vsu
Varunaivibrio sulfuroxidans
Pathway
vsu00630
Glyoxylate and dicarboxylate metabolism
vsu00680
Methane metabolism
vsu01100
Metabolic pathways
vsu01120
Microbial metabolism in diverse environments
vsu01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vsu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
P3M64_00060 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
P3M64_00060 (fdhF)
Enzymes [BR:
vsu01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
P3M64_00060 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4
Fer4_7
Fer4_10
Fer4_8
Fer4_Nqo3
Fer2
Fer4_16
Fer4_9
Fer4_2
Fer4_21
Fer4_6
Fer4_17
TPP_enzyme_M
Fer4_4
Fer4_18
LysM
Fer4_22
Motif
Other DBs
NCBI-ProteinID:
WES30807
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Position
14678..17431
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AA seq
917 aa
AA seq
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MSASFTIEFDGRTVEAQAGETLWQIARRSGIEIEHLCLKDAPGYRADGNCRACLVEVVGE
RTLSASCRRQATPGMVVSSAGDRARSARRGVIELLMASSPGSADDPRSLVARWADKMGIA
RTRYAPRRDASDVTERVRDDSHRAIVFNAGACIHCGLCVRACREIQVNDVIGMAGRGART
HVAFDQDDALGESTCVACGECVQACPTGALSSAAPETWKIDDEDRHVRSLCPYCGVGCQV
DYTVRGGRIIAADGAAGPANLYRLCVKGRFGFDYAHHPDRLTRPLVRREGVAKDPGQIPP
PGEERRAAFREASWDEALEIAARGLAAIRDRDGGAALAGFGSAKGSNEEAYLFQKLIRAG
FVTNNVDHCTRLCHASSVAALMEGLGSAAVTAPFMAAKDADVIIVIGSRPAQNHPVAATF
IKNAVKRGAKLVVMDPRRQALSRHAEYMVQFASGMDVVLLNAMIYTIIAEGLTDNAYIAR
HVEGFEELKSKIAAFVPEKVAAQCGVEAAVIRAVARLYATAKRAIIYWGMGVSQHVHGTD
NVRALIALSLICGHIGREGCGLHPLRGQNNVQGASDVGLIPMVYPDYKAVSDPAVRDMYQ
RYWGVPLSDSPGLTVVEIINAARAGTIKGMYIMGENPAMSDPDAAHARQGLAALEHLVVQ
DIFLTETAWLADVILPASSFFEKEGTFTNTNRQVQMAHPVVPMPGDARQDLWIVQQIARR
IGLDWGEMDAAAVFDEMHGVMASIKGMSWARLQREGAVTYPCAREDAPGQDILFGDGFPT
KTGKGRLAPTDFCAPDELPDDDYPFILTTGRMLEHWHTGAISRHAGILHDLEPVAVVSLN
PATLRRLEAQPGDTLRVGTRRGVVDIQARADRDVPDGMVFIPFCFYEAAANLLTNPKLDP
SGKIPEFKVCAAKVEKA
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgtcatttacgatcgaattcgatggccggacggtcgaggcccaagcaggcgag
accctgtggcaaatcgcccggcgcagcggcatcgagatcgagcacctgtgcctgaaggac
gcccccggctatcgcgccgacggcaattgtcgggcctgcttggtggaggtcgtgggcgag
cgcaccttgagcgcgtcgtgccgccgtcaggcgaccccgggcatggtggtgtcgagcgcc
ggcgaccgggcgcggagcgcccgccggggggtgatcgaactgctgatggcgagcagcccg
ggcagcgccgatgatccgcgctcgctggtggcgcgctgggcggacaaaatgggtatcgcg
cggacgcgctatgcgcctcgtcgcgacgcttccgacgtgacggaacgggtgcgcgacgac
agccatcgcgccatcgtttttaacgccggggcttgtattcactgtggactgtgcgtgcgg
gcgtgccgcgaaattcaggtcaacgacgttatcggaatggcggggcgcggggcgcgcacg
cacgtcgccttcgatcaggacgacgcgttgggcgagagcacctgcgtcgcctgtggcgag
tgcgtgcaggcctgtcccaccggggccttgtcgtccgccgcccccgagacatggaaaatt
gacgatgaggatcgccacgttcgctcgttgtgcccttactgcggggtcggctgtcaggtc
gattataccgtgcgcggcgggcggatcatcgccgccgacggcgcggcgggaccggcgaat
ctataccggctgtgcgtcaagggacgtttcggtttcgattatgcccatcatccggaccgt
ttgacccgccccctggtgcgccgggagggggtggccaaggaccccggacagatcccgccg
ccgggggaggaacggcgggcggcgttccgcgaggcgagctgggacgaggccttggagatc
gccgcccgggggttggcggcgatccgcgatcgcgacggcggcgcggcgctggccgggttc
ggttcggccaagggctcgaacgaggaggcctatcttttccaaaaactgatccgcgccggg
ttcgtcaccaacaatgtcgatcactgcacccgcttgtgccatgcctcgtcggtggcggcg
ctgatggagggactgggctcggcggcggtgaccgcgccatttatggccgccaaggacgcc
gatgtgattatcgtcatcggctcgcgcccggcgcaaaaccatccggtcgccgcgaccttt
atcaagaacgcggtcaagcgcggggccaagctggtggtgatggaccctcgccgtcaggcc
ctcagccgccatgccgagtacatggtgcagttcgcgtcgggcatggacgtcgtattgttg
aacgccatgatctacaccattatcgccgagggcctgaccgataacgcttatatcgcgcgc
catgtcgagggtttcgaagaactgaagagcaaaatcgcggccttcgttccggaaaaagtc
gccgcccagtgcggcgtcgaggcggcggtcattcgcgccgtggcgcgcctgtacgccacg
gcgaagcgcgccatcatttattggggaatgggggtctcccaacacgttcacggcaccgat
aacgtgcgcgcattgatcgcgctgtctctgatttgcgggcatatcgggcgcgaaggatgc
gggctgcatcccctgcgcgggcagaacaacgtgcagggggcgtccgacgttggcctgatc
ccgatggtttaccccgattacaaggcggtatccgatccggcggtgcgcgatatgtaccag
cgctattggggcgtccccctgagcgacagcccggggctgacggtggtcgagatcatcaat
gcggcgcgggcgggaacgatcaagggcatgtacatcatgggcgaaaatcccgccatgtcc
gaccccgacgcggcccacgcccgccagggcttggcggcgttggaacatctcgtcgttcag
gacatttttctgaccgaaaccgcgtggttggccgacgtgatattgcccgcctccagtttt
ttcgaaaaagagggcaccttcaccaacaccaaccgtcaggtgcagatggcccacccggtt
gtcccgatgcccggcgacgcccgccaggacctgtggatcgtccagcaaatcgcgcggcgt
atcggccttgactggggggagatggacgccgcggcggtgttcgatgaaatgcacggcgtg
atggcgtcgatcaagggtatgtcgtgggcgcgtcttcaacgggaaggcgcggtgacgtat
ccgtgcgcgcgggaagacgcacccggacaggatatccttttcggcgacggcttcccgaca
aagaccggtaaggggcgtctggcgccgaccgatttttgcgcccccgacgaactgcccgac
gacgactatccgttcatcctgaccaccgggcggatgttggaacattggcacaccggcgcg
attagccgtcatgccggaatattgcacgatctggaacccgtcgctgtggtctccttgaac
cctgccacgctacgccgcctggaggcgcagccgggcgatactctgcgtgtcgggacccgg
cgcggcgtggtcgatatccaggcgcgcgccgaccgtgacgttcccgatggaatggttttt
attccgttctgtttttacgaggcggcggcgaatcttctcaccaatccgaaactcgacccc
tcggggaagattcccgaatttaaagtgtgcgccgccaaggtcgaaaaagcatag
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