Varunaivibrio sulfuroxidans: P3M64_00155
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Entry
P3M64_00155 CDS
T08892
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
vsu
Varunaivibrio sulfuroxidans
Brite
KEGG Orthology (KO) [BR:
vsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsu03032
]
P3M64_00155 (topA)
03400 DNA repair and recombination proteins [BR:
vsu03400
]
P3M64_00155 (topA)
Enzymes [BR:
vsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
P3M64_00155 (topA)
DNA replication proteins [BR:
vsu03032
]
Prokaryotic type
DNA Topoisomerases
P3M64_00155 (topA)
DNA repair and recombination proteins [BR:
vsu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
P3M64_00155 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WES30825
LinkDB
All DBs
Position
complement(39474..42116)
Genome browser
AA seq
880 aa
AA seq
DB search
MNLVIVESPAKAKTINKYLGAEYTVLASYGHIRDLPSKDGSVQPGDDFAMVWESDARSQK
HVREIIQAAKKADHLFLATDPDREGEAIAWHVLEVLNKGKALNGVDVKRVVFNEITKSAI
LDAFSHPRDIDGEMVNAYLARRALDYLVGFTLSPVLWRKLPGSRSAGRVQSVALRLICER
EDEIDIFVPREYWSVRADFDTGAGVMVNAALTHLDGKKLDKWALPDEAAAQAAVGAIRSG
AFSVAAVEKKQTKRHPAAPFTTSTLQQEASRKLGFSAKRTMQTAQRLYEGASIGGETVGL
ITYMRTDGVQMAAEALTACRALIARDFGEAYLPDAPRVYKSKAKNAQEAHEAVRPTDLTR
LPKAVAAFLDEDQRRLYELIWKRTVASQMESVVLDQVAVDIASGPREIVLRATGSIIAFD
GFYRLYHEGRDETTGDAESNGNDEKERILPEMAVGQALACKTVLPQQHFTQPPPRYSEAS
LVRKLEELGIGRPSTYASIISVLQERNYVRLEQRRFIPEDRGRVVTAFLTNFFKRYMEYN
FTADLEDKLDDISGGRADWKQVLRDFWTAFSASVEDIGQLRVREVLDALNDLLAPHFFPQ
KDDGKDPRTCPTCADGQLSLKLGKFGAFIGCSNYPECRFTRPLTSAGDDQNDMPELEAGP
KLLGVDPVSGLDVTLRKGPYGIYVQLGEQVEGEKKRPKRASLAKGESPAQVDLEKALGLL
ALPRDVGEHPETGKMIQAGLGRFGPYLSYNNMFISLKGDDDPLTIGINRAVTVIAESGKT
PPVELGKHPKDKKPVTVRKGRWGPFVQHGRTKANLPKSTAEEDVTLEMALELLAKGDKGK
GAAKTPKKAPKKAVKKTTKKAPAKKAPAKKKTAPKKAAEA
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgtcatcgtcgaatccccggccaaggccaaaaccatcaacaagtatctcggc
gcggagtataccgtcctcgccagttacgggcacatccgcgacctgccgtcaaaggacggc
tcggtgcagccgggggacgacttcgcgatggtctgggaaagcgacgccagatcgcaaaaa
catgtccgggaaattatccaagcggcgaaaaaggccgaccatctgtttctcgccaccgac
cccgatcgcgaaggcgaggcgatcgcttggcatgtccttgaggtgctcaacaagggcaag
gcgctgaacggcgttgatgtcaagcgcgtggtgtttaacgagatcaccaaaagcgccatt
ctcgacgccttcagccacccgcgcgacatcgacggcgaaatggtcaacgcttacctcgcc
cggcgcgccctggattatctggtcgggttcactctttcgccggtgctgtggcgtaaattg
ccgggatcgcgctcggcggggcgggtgcaatcggtggcgttgcgcctgatctgcgagcgc
gaggacgaaatcgacatcttcgttccccgtgaatattggtccgtgcgcgccgacttcgac
accggcgcgggggtcatggtcaacgccgcgctgacccatttggacggtaaaaaattagac
aaatgggcgctgcccgacgaagccgccgcccaggccgccgtcggcgccatccgttcgggc
gccttctccgtcgccgcagtggagaaaaaacagacaaaacgccacccggcggcgccgttc
accacctcgaccttgcagcaagaagcctcgcgcaaacttggattttccgcaaagcgcacc
atgcagaccgcgcagcgcctctacgaaggggcgtcgatcggcggcgaaaccgtgggcctg
atcacctatatgcgaaccgatggcgtacagatggccgcggaagctttgacagcgtgccgc
gcgttaatcgcccgcgatttcggcgaggcctaccttcccgacgcgccacgggtctataaa
agcaaagcaaagaacgcccaggaggcgcacgaagccgtccgtccgaccgacctgacccga
ttgcccaaggccgtcgccgcctttctcgacgaggatcagcgcagactctacgagctgatc
tggaagcgcaccgtcgccagccagatggaatcggtggtgctcgaccaagtggcggtggac
atcgcctccggcccgcgggaaatcgtcctgcgcgcgaccggttcgatcatcgccttcgac
ggtttttaccgtctctatcacgagggccgggacgagaccacgggcgatgcggagagcaac
gggaacgacgaaaaagagcgcattttacccgaaatggccgtgggccaggcgctggcctgc
aaaaccgtgctcccccaacagcacttcacccagccgccaccgcgctattcggaagcctcg
ttggtgcgcaagctcgaagagctgggcatcggtcgcccatcgacctacgccagcattata
tcggttctgcaggagcgcaattacgtgcgcctggagcaacgccgcttcatccccgaggac
cggggccgggtcgtcaccgcgttcctgaccaatttcttcaagcgctacatggaatacaat
ttcaccgccgacctggaagacaagctcgacgatatctccggcgggcgggccgattggaaa
caggtcctgcgcgacttttggacggcgttcagcgcctcggtcgaggacatcggccaactg
cgcgtacgcgaagttctcgacgccctgaacgatctgctcgccccccatttcttcccgcaa
aaagacgacggcaaggatccgcgaacctgcccgacctgcgccgatggccaactgagcctg
aagctgggaaaattcggcgccttcatcggctgttcgaactatcccgaatgccgcttcacc
cgccccctgacatcggcgggcgacgatcaaaacgacatgccggagttggaggcggggccg
aaactgctgggcgtcgatccggtgagcggcctcgacgtcaccttgcgcaagggaccgtac
gggatctacgtgcagttgggcgaacaggtcgagggcgagaaaaaacgcccgaaacgcgcc
tcgctcgccaagggagaaagccccgcccaggtggatctggaaaaagccttgggcctgctc
gccctgccccgcgacgtcggcgaacatcccgaaacgggaaaaatgatccaggccggtctc
gggcgctttggcccctacctcagctacaacaacatgtttatttccctgaagggcgacgac
gaccctttgaccatcggcatcaaccgggcggtcaccgtgatcgccgagtcgggcaagacc
ccgcccgtggaactgggcaagcaccccaaggacaagaaaccggtcaccgtgcgcaagggg
cgttgggggccgttcgtgcagcacggacgcaccaaggcgaacctgcccaagtccaccgcc
gaggaggacgtcaccttggagatggccctcgaacttttggccaagggggataaaggcaag
ggtgcggccaagactccaaaaaaggccccgaaaaaggctgtgaaaaaaacaacgaaaaaa
gccccggctaaaaaagcgcccgcgaaaaagaaaaccgcgccgaaaaaggccgccgaagct
taa
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