Varunaivibrio sulfuroxidans: P3M64_01535
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Entry
P3M64_01535 CDS
T08892
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
vsu
Varunaivibrio sulfuroxidans
Pathway
vsu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P3M64_01535 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsu03400
]
P3M64_01535 (uvrA)
DNA repair and recombination proteins [BR:
vsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P3M64_01535 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P3M64_01535 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
nSTAND1
AAA_16
AAA_29
DnaJ_CXXCXGXG
RsgA_GTPase
AAA_23
CA109-like
AAA_21
Motif
Other DBs
NCBI-ProteinID:
WES31088
LinkDB
All DBs
Position
complement(351136..353994)
Genome browser
AA seq
952 aa
AA seq
DB search
MVQTIHVRGAREHNLKNIDVEIPRDRLTVITGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLELMSKPDVESIEGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARVGVPH
SPATGLPIESQTVSQMVDRIMAMGENARLLLLAPIVRGRKGEYKKELQDFAKRGFQRVKI
DGALYEIDDTPTLNKKVKHDIDIVVDRLVVRDGIETRLADSLETTLALADGLAFIENATG
GARTPFSAKFACPVSGFTIDEIEPRLFSFNNPFGACPACDGLGTEMYFDPALVIPDDRLT
LNQGAIAPWANSTSQYYVQTLESLAAHFGFSLTTALQDLGDEIRQLLLYGSGEDAVTMRY
DDGRKAYQIAKPFEGVIPNMERRWRETDSSWVRDELGKYQTVTRCETCAGHRLKPEALAV
KIAGLHISQVAEMSIEQAAGWFADLPRQLGVKQMEIAQRILREINERLGFLMNVGLDYLT
LSRASGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDRLLGTLMRLRDLGN
TVIVVEHDEDAIRSADYLIDMGPGAGVHGGSVIARGAPEDVMAASDSLTGQYLTGIRSIP
VPTRRRKFDKKRLLSVKGARANNLDNVTADFPLGLFTCVSGVSGGGKSSLVVETLYNALA
QRLNRARLHAGDHDEITGIEGIDKVVDIDQSPIGRTPRSNPATYTGAFTPIREWFAGLPE
AKRRGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVQCDVCKGKRYNRETLELTF
RGKSIADVLDLTVDEAVEYFKAVPAIRDKMMSLQRVGLGYIHLGQQATTLSGGEAQRVKL
AKELSKRATGKTFYILDEPTTGLHFEDIKKLLEVLHTLVDAGNTMVVIEHNLEVIKTADW
IIDMGPEGGSKGGKIVVAGTPEAIAATKESYTGHYLKPYLAAAKKKKKRIAR
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggttcagaccatccatgtgcgcggtgcgcgcgaacataacctgaagaatatcgacgtc
gagattccccgcgatcgcttgaccgtgatcaccgggctgtccgggtcgggtaagtcgtct
ctggcgttcgacaccatctacgccgagggacagcgacgctacgtcgaaagcctgtcggcg
tatgcgcgtcagtttctcgaactgatgtccaaacccgatgtcgaatcgatcgaagggttg
tctccggcgatttccatcgaacaaaaaacgacctcgcgcaacccccgctccaccgtcggc
acggtgaccgaaatctatgattacatgcgcctgttgttcgcccgcgtcggagtgccccat
tcacccgccaccggattgccgatcgaaagtcagaccgtcagccaaatggtcgatcgcatt
atggcgatgggcgagaacgcccgattgttgctgttggctccgatcgtgcgcggacgcaag
ggggaatataaaaaagagcttcaggatttcgccaaacgcggctttcagcgggttaaaatc
gacggcgcgctgtacgagatcgacgacaccccgacgcttaacaaaaaggtcaagcacgac
atcgatattgtcgtcgataggttggttgtgcgcgacgggatcgagacgcgcctcgccgac
agcttggagaccaccctggccctggccgacggcctcgcctttatcgaaaatgccaccggc
ggcgcgcgtacccccttttccgccaagttcgcctgtccggtttcgggtttcaccatcgac
gagatcgaaccgcgcctcttttccttcaacaatcctttcggcgcgtgcccggcgtgcgat
gggttgggcaccgagatgtacttcgatcccgcgttggtgatccccgacgacaggttgacc
ctcaatcagggggcgatcgcgccgtgggccaattcgaccagccaatattacgtacagacc
ctggaaagcctggcggcgcatttcggcttttccctgaccacggcgttgcaggacctgggc
gacgagatccgccagcttttactgtacggcagcggcgaggatgccgtcaccatgcgctac
gacgacgggcgcaaggcctatcaaatcgccaaaccgttcgagggcgtcatccccaacatg
gagcggcgctggcgcgagaccgattcgtcgtgggtgcgcgacgaactgggtaaataccaa
accgtgacgcggtgcgagacctgcgccggtcatcgcctcaaacccgaggcgctggccgtc
aagatcgccggtctgcatatttcccaggttgccgaaatgtcgatcgaacaggccgccggg
tggttcgccgacctgccccgccagcttggcgtcaagcagatggaaatcgcccaacggatc
ttgcgtgagatcaacgaacgcctgggatttttgatgaatgtcggcctcgattacctgacc
ttgtcgcgcgcctcgggaacgttgtcgggcggagagagccagcgcattcgcctggcgtcg
cagatcggctcggggctaaccggggtgctctacgtcttagacgagccgtcgatcggcctg
caccagcgcgataacgaccgcctgttgggcaccctgatgcgcctgcgcgacttgggcaac
acggtgatcgtcgtcgaacacgacgaggacgccatccgcagcgccgattacctcatcgac
atggggccgggagcgggcgtgcacggcgggtcggtcatcgcccgcggcgcccccgaggac
gtgatggccgcgtccgacagtttgaccggccaatatctgaccgggatccgttccatcccc
gtacccacacggcggcgcaagttcgataaaaaacgcctccttagcgtcaagggcgccagg
gccaacaatctcgataatgtcacggcggacttccccctcggcttatttacctgcgtcagc
ggcgtttcgggcggggggaagtcgagcctcgtcgtcgaaaccctatacaacgccctggcg
caacggctgaaccgggcccgtttgcacgccggcgaccatgacgaaatcaccggcatcgaa
gggatcgataaagtcgtcgatatcgatcaaagcccgattgggcgcacccccagatccaac
cccgcgacctataccggggcgtttacaccgatccgcgaatggttcgcgggcctacccgaa
gccaagcgccggggctacaaaccgggccgcttttcgttcaacgtcaagggcggtcgctgc
gaggcctgccagggcgacggcgtgatcaagatcgagatgcatttcctgcccgacgtctat
gtccaatgcgacgtctgcaagggcaaacgctacaaccgcgaaaccctggaactgacgttc
cggggcaaatccatcgccgacgtcctcgatctgacggtcgatgaggcggtcgaatatttt
aaggcggtcccggcgatccgcgacaagatgatgtccctgcaacgggtcggcctgggctat
atccacctcggccagcaggcgacgacactctcgggcggcgaggcgcaacgggttaagctg
gccaaggaactgtccaagcgcgccaccggaaaaaccttttacatcctcgacgagccgacc
acgggcctgcatttcgaagacatcaagaaattactcgaagtcttgcataccctggttgac
gccggcaacaccatggtcgtcatcgaacataacctggaagtcatcaaaaccgccgattgg
atcatcgacatggggcccgagggcggctcaaagggcggcaagatcgtcgttgccggaacg
cccgaagccatcgccgccaccaaggaaagctacaccgggcattacctgaaaccctatctg
gcggcggcaaaaaagaagaaaaaacggatcgcgcggtaa
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