Varunaivibrio sulfuroxidans: P3M64_01590
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Entry
P3M64_01590 CDS
T08892
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vsu
Varunaivibrio sulfuroxidans
Brite
KEGG Orthology (KO) [BR:
vsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsu03032
]
P3M64_01590 (gyrA)
03400 DNA repair and recombination proteins [BR:
vsu03400
]
P3M64_01590 (gyrA)
Enzymes [BR:
vsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
P3M64_01590 (gyrA)
DNA replication proteins [BR:
vsu03032
]
Prokaryotic type
DNA Topoisomerases
P3M64_01590 (gyrA)
DNA repair and recombination proteins [BR:
vsu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
P3M64_01590 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
CEP76_C
Motif
Other DBs
NCBI-ProteinID:
WES32250
LinkDB
All DBs
Position
362632..365430
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AA seq
932 aa
AA seq
DB search
MPPISDSPIATIAIEDEMQTSYLDYAMSVIVSRALPDVRDGLKPVHRRIIHSMNESGFDA
TKPFRKSARIVGDVMGKYHPHGDSAIYDAMVRMAQNFSMRLPLIDGQGNFGSMDGDRAAA
MRYTEARMAHSAHALVADIDKDTVDFRANYDESAHEPTVLPARFPNLLVNGAGGIAVGMA
TNIPPHNLGEVIDACMALIDDPDLSIDALTAYVQGPDFPTGASILGRQGIYSAYHTGRGS
VIMRGRATIEEIRKDREAVVITEIPYQVNKSRMVEIMAECVRDKRIEGISDIRDESDRHG
VRVVVEVKRDAMAEIVLNQLYRYTPLQTSFGINMLALNGGRPQLMNLKDVLQAFVDFREE
VIRRRTIFLLSKARDRAHVLVGLGIAVANIDEVIALIRKAPDSTIAREQLMARSWPASDV
APLIALIDEPGRQVEDGGVYWLSEVQAKAILELRLQRLTGLERDKIAGDLRDLGAEIESY
LEILDSPGRLRDVMREELLEMRDKFATPRRTALEDSEFEHDIEDLIQREDMVVTVTNTGY
VKRVPLSTYRAQRRGGKGRSGMSTRDEDFVNKVFVVNTHTPVLFFSSNGMVYKMKVYKLP
LGSPQARGQAIINLLPLDKGETITTLMPLPEDESTWSDMFVMFATASGGVRRNRLSDFVN
VKSNGKIAMKLDEGEQLVGVKVCGEDDDILLAAQGGKCIRFPVTAVRVFASRASSGVRGM
RLGAKDRVISMSILRHVDFDTDERDAYLKISNAQRRAENGGNGGEDDGESVAPDFAQSLL
SAERFDEMARDEQFLLSITQNGYGKRTSAYEYRIAGRGGQGITNIETSSRNGPVAASFPV
EATDHVMMVTDGGKLIRTGVAEVRIAGRNTQGVTLFKIAKGEKVVSVTRLHEDEDEDDGA
EETGGDAPSTEAGNEDAGTPSDGSPGDGISSE
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
ttgccgcccatttcagattctcccatcgcgacaatcgcgatcgaagacgagatgcagacc
tcatatctggattacgcgatgagcgtaatcgtcagccgcgccttgcccgacgtccgcgac
ggtcttaagcccgtgcaccggcgcattatccattccatgaacgagagcggattcgacgcg
accaagccgtttcgcaagtcggcgcgcatcgtcggtgacgtcatgggtaagtaccacccg
catggcgattcggcgatttacgacgccatggtgcgcatggcgcagaatttttcgatgcgt
ctgccgctgatcgacggtcagggcaacttcggttcgatggacggcgaccgggcggcggcg
atgcgctataccgaggcgcgcatggcccattcggcgcacgccctggtcgccgatatcgac
aaggacaccgtcgattttcgcgccaactatgatgaaagcgcgcatgaaccaacggtgctt
ccggcccgctttcccaatcttctcgtcaacggagcgggtggtatcgcggtcggcatggcg
accaatatcccgccgcacaacctgggtgaggtgatcgacgcctgcatggccttgatcgac
gaccccgatctgtccatcgacgccctgacggcgtatgttcagggacctgatttcccgacc
ggagcgtccatcttggggcgtcaggggatttattccgcctatcacaccggacgcggttcg
gtgatcatgcgcggccgggcgacgatcgaggaaatccgcaaggaccgcgaggccgtggtc
atcaccgaaataccctatcaagtcaataagtcgcgcatggtcgagatcatggccgagtgc
gtgcgcgacaaaaggatcgagggaatttccgacattcgcgacgagtccgatcgtcacggc
gtacgcgtggtggtcgaggtcaagcgcgacgcgatggccgagatcgtcctcaatcagctt
tatcgctataccccgctgcaaaccagcttcggcatcaacatgctggcgctgaacggcggc
cgaccgcagttgatgaacttaaaggacgtgcttcaggcgttcgtcgatttccgtgaagaa
gtgatccgacggcgcactatttttcttttgtccaaggcgcgcgacagggcgcatgtcttg
gtcggtttgggaatcgcggtggcgaatatcgacgaggtcatcgccctgatccgcaaggct
cccgactcgacaattgcccgcgagcaattgatggcgcgttcatggcccgccagcgatgtc
gcccccttgattgcgttaatcgatgagccgggacgccaggttgaagatggcggcgtttat
tggctttccgaggtccaggccaaggccatcttggaactgcgcctacagcgcctgaccggg
ctggaacgcgataaaatcgccggtgatttgcgcgatttgggcgccgagatcgaaagctat
ctggagatactggattccccgggcaggttgcgcgatgtgatgcgcgaagaactgttggaa
atgcgcgacaagttcgccacccctcggcgcacggcgttggaagacagcgaattcgaacac
gatattgaagaccttatccagcgtgaagacatggtggtcacggtgaccaatacgggctat
gtcaagcgggtgccgctatcgacctatcgcgcccagcgccggggcggaaagggacgttcg
gggatgagcacccgggatgaagatttcgtcaataaggtatttgtcgtcaatacccatacg
ccggttttgttcttctcttccaatggcatggtctacaaaatgaaggtctacaagctgcct
ctgggcagtccgcaggcccgggggcaggcgatcatcaatttgctgccgctggacaagggt
gagacgatcaccaccttgatgccgctgcccgaggatgaaagcacatggtcggacatgttc
gtcatgttcgccaccgcgtcgggcggggtgcggcgcaaccgcctgtcggatttcgtcaac
gtcaagtcgaacggtaaaatcgccatgaaactcgacgaaggcgaacagctcgtcggggtc
aaggtttgcggcgaggatgacgacatcttgctcgcggcgcagggtggaaaatgcatccgc
ttcccggtgacggctgtgcgcgttttcgccagccgggcgtcgtccggagtgcgtggcatg
cgcctaggggcgaaggatcgggtgatttcgatgtcgattctcaggcatgtcgatttcgat
accgacgaacgcgatgcctatttgaaaatttcgaacgcccaaaggcgcgccgaaaatggt
gggaatgggggagaggacgacggagaatccgtcgcgcccgatttcgctcaaagcttattg
agcgccgagcgtttcgacgaaatggcgcgcgacgagcaattcctcttgagtattacgcaa
aacggttacggcaagcgcacatcggcgtacgagtaccgaatagcaggacgtggcgggcag
gggatcaccaatatcgaaacttcctcgcgcaatggtcccgtggcggcgtcgttcccggtg
gaggccaccgatcatgtgatgatggtgaccgacggcggcaagttgatccgcaccggtgtc
gccgaggtgcgcatcgccgggcgcaatacccagggcgtgaccttgttcaagatagccaag
ggcgaaaaagtcgtctcggtgacccgtctacacgaagacgaggatgaagacgacggcgcc
gaggaaaccggcggggacgcgccatccacggaagcggggaacgaagatgcggggacgcct
tccgatggttcgcccggggacgggatttcgtcggaataa
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