Varunaivibrio sulfuroxidans: P3M64_02905
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Entry
P3M64_02905 CDS
T08892
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vsu
Varunaivibrio sulfuroxidans
Pathway
vsu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P3M64_02905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsu03400
]
P3M64_02905
Enzymes [BR:
vsu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
P3M64_02905
DNA repair and recombination proteins [BR:
vsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
P3M64_02905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WES32158
LinkDB
All DBs
Position
638147..638758
Genome browser
AA seq
203 aa
AA seq
DB search
MCPRLSEFRSLNRVQYPDFHNAPVPAFGPLDSEILIVGLAPGLKGANRTARPFTGDWAGD
LLYPTLCEFALAQGVYGANPNDGLTLCNCRITNAVRCVPPQNKVTAHEVRNCGVFLRHEI
AAMPNLRAILALGGVAHGGVLAALGYKKSAYRFAHNARHRLTPDLFLLDSYHCSRYNTNT
GRLTAKMFRDVFKTLTTYIAPAP
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ctgtgcccgcgcctaagcgaattccgtagtctcaaccgcgttcaatatcccgattttcac
aacgcccccgttcccgccttcggccctctggatagcgaaattttgattgtcggcctggcc
cccggcctgaagggagcgaaccgcaccgcccgcccctttaccggggattgggcgggtgat
ttactctatccgacgttatgcgaattcgccttggcgcaaggcgtatacggcgccaacccc
aacgacgggctgaccttatgcaattgccgcataaccaatgccgtgcgttgcgtgccgccg
caaaacaaggttacagcgcacgaggtccgaaattgtggtgtttttttacgccacgaaatc
gcggcgatgcccaacctacgtgcgatattggcgctgggcggggtcgcccacggcggcgtc
ttggcggcgctggggtacaaaaaaagcgcctatcgcttcgcccacaatgcgcgccaccgt
ctcacccccgaccttttccttctcgatagctatcactgttcgcgttataataccaacacc
ggtcgcctgacggcaaagatgtttcgtgatgtttttaaaacacttacgacttatatcgca
cccgcgccgtga
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