KEGG   Varunaivibrio sulfuroxidans: P3M64_02985
Entry
P3M64_02985       CDS       T08892                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
vsu  Varunaivibrio sulfuroxidans
Pathway
vsu00010  Glycolysis / Gluconeogenesis
vsu00020  Citrate cycle (TCA cycle)
vsu00260  Glycine, serine and threonine metabolism
vsu00280  Valine, leucine and isoleucine degradation
vsu00310  Lysine degradation
vsu00380  Tryptophan metabolism
vsu00620  Pyruvate metabolism
vsu00630  Glyoxylate and dicarboxylate metabolism
vsu00640  Propanoate metabolism
vsu00670  One carbon pool by folate
vsu00785  Lipoic acid metabolism
vsu01100  Metabolic pathways
vsu01110  Biosynthesis of secondary metabolites
vsu01120  Microbial metabolism in diverse environments
vsu01200  Carbon metabolism
vsu01210  2-Oxocarboxylic acid metabolism
vsu01240  Biosynthesis of cofactors
Module
vsu_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
vsu_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:vsu00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    P3M64_02985 (lpdA)
   00020 Citrate cycle (TCA cycle)
    P3M64_02985 (lpdA)
   00620 Pyruvate metabolism
    P3M64_02985 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    P3M64_02985 (lpdA)
   00640 Propanoate metabolism
    P3M64_02985 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    P3M64_02985 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    P3M64_02985 (lpdA)
   00310 Lysine degradation
    P3M64_02985 (lpdA)
   00380 Tryptophan metabolism
    P3M64_02985 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    P3M64_02985 (lpdA)
   00670 One carbon pool by folate
    P3M64_02985 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vsu04147]
    P3M64_02985 (lpdA)
Enzymes [BR:vsu01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     P3M64_02985 (lpdA)
Exosome [BR:vsu04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   P3M64_02985 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 NAD_binding_8 FAD_oxidored GIDA HI0933_like DAO FAD_binding_2 FAD_binding_3 AlaDh_PNT_C 2-Hacid_dh_C Lys_Orn_oxgnase 3HCDH_N XdhC_C NAD_binding_7
Other DBs
NCBI-ProteinID: WES31353
LinkDB
Position
complement(653358..654758)
AA seq 466 aa
MADTQFDLIVIGGGPGGYVAAIRAAQLGMKAAVVEARHLGGICLNWGCIPTKALLRSAEV
YHTMKRAAEFGLKADGIAFDLDAVVKRSRAVSKRLNMGVAHLLKKNKVTVFDGFGKLSGK
GKVHVEKDGKGVADLAAKHIILATGARARTFPGLEPDGDLIWTYKDALVPNTMPKKLLVV
GSGAIGIEFASFFHTLGAEVTVVEVMDRIMPVEDEEISAFARKAMEAEGMKIVTGATVKA
LKKGKGSVTATIEAAGKSESQTFDRVILAVGIVGNVENIGLEGTKAKVAKTHVETDKWCQ
TGEPGVYAIGDLTGAPWLAHKASHEGVICVEKIAGVKNVHPLDPLKIPGCTYCRPQVASV
GISEKAARDKGLDIKVGRFPFQGNGKAIALGEPEGMVKTIFDAKTGELLGAHMVGAEVTE
LIQGYGVAMTLETTEEDLMHTVFPHPTLSEMMHESVLSAFGRAIHF
NT seq 1401 nt   +upstreamnt  +downstreamnt
atggcggacacccaatttgacctgatcgtgatcggcggcgggccgggcggttacgtggcg
gcgatccgcgccgcgcaactgggcatgaaggccgccgtcgtcgaagcccggcacctgggc
ggcatttgcctcaactggggctgtatcccgaccaaggcgctgctgcgttcggcggaggtc
taccacaccatgaagcgcgccgccgagttcggcctcaaggcggacgggatcgccttcgac
ctggacgccgtcgtcaagcgttcgcgggcggtctccaagcgtctcaacatgggcgtcgct
catctgttgaagaaaaacaaggtcaccgtgttcgacggttttggcaagctgtccggcaag
ggtaaggtccacgtcgaaaaagacggcaaaggggtcgccgatttggcggccaagcacatc
atcctggcgaccggggcgcgggcgcgcacttttccggggttggagccggacggcgatctg
atctggacctataaggacgccctcgtgcccaacaccatgccgaaaaaattgctggtggtg
ggctcgggcgcgatcgggatcgaattcgccagcttcttccataccctaggcgcggaggtc
accgtggtcgaggtgatggaccggatcatgccggtcgaggacgaggaaatttccgccttc
gcgcgcaaggcgatggaggccgagggtatgaaaatcgtcaccggcgccacggtgaaagcc
ctgaaaaagggcaagggcagcgtcaccgccaccatcgaggcggcgggcaaaagcgaaagc
caaaccttcgatcgcgtcatcctggcggtcggcatcgtcggcaatgtggaaaatatcggc
ctggaaggcaccaaagcgaaggtcgccaagacccacgttgaaaccgacaaatggtgccaa
accggcgagcctggagtgtatgccatcggcgatctgaccggcgcgccttggctggcccac
aaagccagccacgaaggcgtgatctgcgtcgagaaaatcgccggcgtgaagaatgtgcat
cctctcgaccccctgaaaattcccggctgcacctactgccgcccccaggtcgccagcgtc
ggcattagcgaaaaggcggcgcgtgacaaggggttagatatcaaggtcggacgtttcccg
tttcaaggcaacggcaaggcgatcgccctgggcgagccggagggcatggtgaaaaccatc
ttcgacgccaagaccggcgagcttctgggtgcgcacatggtcggcgccgaggtcaccgaa
ttgatccagggctatggcgtcgcgatgacgctggaaaccaccgaggaagacctcatgcac
accgtgttcccgcatccgaccttgtcggagatgatgcacgaaagcgtgctcagcgcgttt
ggccgggccattcacttctag

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