Varunaivibrio sulfuroxidans: P3M64_07375
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Entry
P3M64_07375 CDS
T08892
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
vsu
Varunaivibrio sulfuroxidans
Brite
KEGG Orthology (KO) [BR:
vsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsu03400
]
P3M64_07375 (addB)
Enzymes [BR:
vsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P3M64_07375 (addB)
DNA repair and recombination proteins [BR:
vsu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
P3M64_07375 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
WES29486
LinkDB
All DBs
Position
1553522..1556584
Genome browser
AA seq
1020 aa
AA seq
DB search
MASIQTPPTPRLRVYTIAGHVSFVDALAQGLIARAEGGPLALGAYRILLPTRRSCRALGD
AFLRQSGGAPTLLARMEPLGDVDEEEIQIETGAFGLDDGPDNEAPDGPDDLPPAIGTMRR
TFLLADLIGARAHAEARALPPDQAVRLAGELSRFLDQVHTERRDLNDLKDLAPEAFAEHW
QDTLRFLSILGDHWPAILAGEGALDPAMKRNLLLERRARLWAQSPPKYPVFAAGSTGSVP
ASADLLRVVAHLPDGGVVLPGLDTEASPDMWREIAAEPTHPQHAMAKLLEHIGISPAEVQ
PWGDDVAPPARIARMRLIHQCLSPASRLETWREAPPPPSEALDGVTRVDCPTSQIEATVI
ALIMRRTLNVPGRTAALVTADRSLARRVGAELSRWSIALDDSAGVPLNKTPPGSFLRLLC
AMLDDAFSPVATLACLKHPLAALGMARRDFRARVRRLEIALLRGPRPAPGVAGLRAALTA
YAHDVQARAHAGAHPQELGDLLDRLERVCAPLQSFFNHDAAGFDAFAHALVATAEGLAAD
AEHGGEDRLWAEEAGEALADFIGEARDAARGCMTIAPRHSAALLDVLMAEKVVRSRYPKH
PRLSIWGPLEARLQRADVVIMGALNEGSWPPEVQPSPWMSRPMQRRFGLTLPERRVGLSA
HDFAQALGAETVYITRSKRSGGAPTNPSRWLARITTFLDGHGMGAALTTARDGADWLGWA
HALNAPRSQTPCSPPAPTPPVHTRPASLSVTRVETWIRDPYALYARHILRLKPLDPIDAD
PGAGDRGSVVHDILDRFVRHHPGALGPDALDRLLEIGRDRFAALIAYPGVRAFWWPRFER
IADWFIAFERNRRARGVVTVACEVDGKLALPDPRGGNFILGARADRIDRIADGGLEIVDY
KTGVVPSVKQVTSGLAPQLPLEAAIATAGGFAGVPKQAVSRLSYVKLSGGRVPGKDIPLK
VDVDDLAADALSGLKRMIARYGDPRTPYLSRQRVMYEQRQGDFDHLARIAEWSVQEEGDQ
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggcctccatccagacgccccccactccccggctccgggtttacaccatcgccgggcac
gtttccttcgttgacgccttggcccaaggtctgatcgcccgcgccgagggcggccccctg
gcgcttggcgcctatcgtatcttgctgccgacccgccgttcgtgccgggcgctcggcgac
gccttcttgcgtcaaagcggcggcgcgccgacgctgcttgcgcgcatggagccattgggc
gatgtcgatgaagaggaaatccaaatcgaaaccggcgccttcggactggacgacggaccg
gacaacgaagcccccgatgggccggacgaccttccccccgccatcggaacgatgcgcaga
acctttctgttggccgatctcatcggggcgcgcgcccatgccgaagcgcgcgccctgccc
cccgatcaagccgtccgcttggccggggaactgtcgcgttttctcgaccaagtccatacc
gagcggcgcgatttgaacgacctgaaagacttggcgcccgaggccttcgccgaacattgg
caggacaccttgcggtttttgtccatcctcggcgatcactggcccgccattttggccggc
gaaggcgcccttgatccggcgatgaagcgtaatcttttgctcgaacggcgcgcccgacta
tgggcgcaatcgccgccgaaatatcccgttttcgccgccggatcgaccggctccgtcccc
gccagcgccgatttgctgcgcgtcgtcgcccacttgcccgatggtggcgtggtcttgccc
ggcctggataccgaggcctccccggatatgtggcgagaaatcgccgcggaaccgacccat
cctcaacatgcgatggccaaattgctggagcatatcggcatttctcccgcagaggttcaa
ccctggggcgatgacgtcgccccccccgccaggatcgccaggatgcgcttgattcaccag
tgtctatccccggcgagccgcctcgaaacttggcgtgaagccccgccgccgccgagcgag
gccctggatggggtgacccgcgtggattgcccgacctcccaaatcgaggccaccgtcatc
gccttgatcatgcgtcgcacccttaacgttcccggacgcaccgccgccttggtgaccgcc
gaccggagtctggcccggcgcgtcggcgcggagctttcccgttggtcgatcgcactcgac
gattcggccggcgttccgctaaacaagacgccaccggggagctttctacgcctgctttgc
gccatgctggacgacgcgttttctccggtagcgacgctggcttgtctaaaacaccccttg
gccgccctgggcatggctcggcgggattttcgcgcccgggtgcgacgtttggaaatagcc
ctcctgcgcggccctcgcccggcgccgggcgtcgccggattgcgcgccgcgctgacggcg
tacgcccatgacgtccaggcgcgggcgcacgccggcgcgcaccctcaagaactgggagat
cttctggatcgactggaacgggtttgcgcgccgctacaatcatttttcaaccacgacgcc
gccggtttcgacgccttcgcccacgccctcgtcgccaccgcggaaggtttggccgcagac
gccgaacacggcggcgaggatcgcctatgggcggaggaagccggcgaggcgctggccgat
tttatcggcgaggcgcgcgacgccgcccgaggatgcatgaccatcgcgccacgccacagc
gcagcgctgcttgacgtcctgatggccgaaaaggtcgtgcgttcgcgctaccccaaacat
ccgcggctaagcatttggggccccctagaggcccgccttcagcgtgcggacgtggtgatc
atgggggccctcaacgaaggatcgtggccgcccgaggtccagcccagcccgtggatgagc
cgtcccatgcagcgccgtttcgggttgacccttcccgagaggcgggtcggtctttcggcg
catgatttcgcccaagccctgggcgccgaaacggtttacatcacccgttccaagcggtcc
ggcggcgcgccgacaaacccgtcgcgatggttggcgcggatcacgacctttctcgacggt
catggcatgggcgcggccctcaccaccgcgcgcgacggcgccgattggctgggctgggcc
catgcgttgaacgccccgcgatcgcagactccatgttcgccacccgccccaacgccgccc
gtccacacccgcccggcgtcactttcggtaacccgcgtcgaaacctggattcgcgaccct
tatgcgctttacgcccgccatatcttgagactgaaacccctcgatccgatcgacgccgac
cccggcgccggggaccggggatcggttgttcacgacattcttgatcgcttcgtccgtcat
caccccggcgcgctggggccggacgccctggaccgattgctcgaaatcggccgcgaccgt
ttcgcggcgctcatcgcctaccccggcgtgcgcgccttttggtggcctcgcttcgaacgc
atcgccgattggttcatcgccttcgaacgcaaccgccgggcgcggggcgtcgtcaccgtc
gcctgtgaagtggacgggaaattggcgttacccgatcccaggggcgggaacttcatcctc
ggcgcgcgcgccgaccgcatcgaccgcatcgcggatggcggactggagatcgtcgattac
aaaaccggcgtcgtgcccagcgtcaagcaggtcacaagcggcctcgcgccgcagttgccc
ttggaggcggcgatcgcgacggcggggggctttgccggcgtgcccaaacaggccgtctcc
cggctcagttacgtcaagctgtccgggggccgcgtcccgggtaaggatattcccctcaag
gtggatgtcgatgacctcgccgccgacgccctaagcggccttaagcgcatgatcgcgcgc
tatggcgacccacgaacgccatacctctcccgccagcgggttatgtacgagcaacgccag
ggagatttcgaccaccttgcgcgcatcgccgaatggtcggttcaagaagagggcgatcaa
tga
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