Varunaivibrio sulfuroxidans: P3M64_07865
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Entry
P3M64_07865 CDS
T08892
Symbol
rimK
Name
(GenBank) 30S ribosomal protein S6--L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
vsu
Varunaivibrio sulfuroxidans
Brite
KEGG Orthology (KO) [BR:
vsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vsu03009
]
P3M64_07865 (rimK)
Ribosome biogenesis [BR:
vsu03009
]
Prokaryotic type
ribosomal protein modification factors
P3M64_07865 (rimK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
Zn_protease
GSH-S_ATP
ATP-grasp_3
ATPgrasp_ST
R2K_3
Dala_Dala_lig_C
ATPgrasp_YheCD
GARS_A
ATPgrasp_Ter
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
WES29570
LinkDB
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Position
complement(1657993..1659390)
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AA seq
465 aa
AA seq
DB search
MTINANKDLVLGWEEWVSLPGLGLPAIRAKVDTGAKTSALHAFSIEPYGRENRRKVRFGI
HPIPERPEIEVYCSADLVDQREITSSNGETELRYIISTSLDIGGIQWPIEISLTNRETMQ
YRMLIGRSALQDKAIVDPNKSCVQGVLNEGAYDDFPRREAPKRSLKIGILSREPNSYSTR
RLAEAAEERHHLVEVINTTQCYMNITSMRPEVHIDGRKLDGFDAIIPRIGSSVTFYGMAV
VRQFEMMGVYSLNSSAAIGASRDKLYAHQLLARNGIGMPITGFARSPNATSELIKFVGGA
PLVLKLLEGTQGKGVVLAETKKAAESVIGAFQGLKANILVQEFIKEAGGADIRCFVIGGK
VIAAMKRQGEEGEYRSNLHQGGKAERVRITKEERAAAVKAAKVLKLGMAGVDLLRAEDGP
KVLEVNSSPGLEGIEKVTGKNIAGLVIDYIEKYARPMPVGGRSKL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacgataaacgcgaacaaggatcttgttttgggctgggaggaatgggtgtccctgccc
ggcctcggcctgcccgcgatccgcgccaaggtggacaccggggccaagacctcggcgttg
cacgccttttccatcgaaccgtatggccgtgaaaaccggcgcaaagtgcgtttcggcatt
catccgattcccgaacgtcccgagatcgaggtttattgttccgccgaccttgtcgatcag
cgcgagatcaccagttccaacggcgagaccgaactgcgctatatcatctccacgtccctg
gatatcggcggtatacagtggccgatcgaaatttccctgaccaaccgggaaacgatgcag
taccgcatgctgatcgggcgcagcgctttgcaggacaaggccatcgtcgatcccaacaaa
tcgtgcgttcagggtgtcttgaacgagggggcatatgacgattttccgcgccgcgaggcg
ccgaagcgctcgctcaaaatcggcatcctgtcgcgcgagccgaacagctattcgacccgc
cgcctggccgaggcggcggaggaacgccaccacttggtcgaggttatcaacaccacgcaa
tgttatatgaacatcacctcgatgcgtcccgaagtgcatattgacgggcgcaaattggac
ggtttcgacgcgatcattccgcgcatcggatcgtcggtgacgttctacggcatggcggtg
gtccgccagttcgagatgatgggcgtctatagcctgaattcgtcggcggcgatcggggcg
tcgcgcgacaagctgtacgcccaccagttgctggcgcgtaacggtatcggcatgccgatc
accggtttcgcccgctcgcccaacgccacgtccgaactgatcaaattcgtcggcggcgcg
ccgctggtgctcaagcttttggaaggcacccaaggcaagggcgtcgtcctcgccgaaacc
aaaaaggcggcggaatcggtgatcggcgcatttcagggcctgaaggcgaacatcctggtc
caggaattcatcaaggaggcggggggtgcggatatccgttgcttcgtcatcggcggcaag
gtgatcgcggcgatgaagcgccaaggcgaggagggagaataccgatccaacctacaccag
ggcggcaaggcggagcgggtgcgcattaccaaggaagagcgggcggcggccgtcaaggcg
gcgaaggttctgaaattgggaatggcgggcgtcgatctgttgcgcgccgaggacggcccc
aaggtcctcgaagtcaattcctcgcccggcctggagggtatcgagaaggttaccggcaag
aatatcgccggtctcgtgatcgactatattgaaaaatacgcacgtccgatgcccgtcggg
gggcggagcaaactttaa
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